RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CSF3P09919 207 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 CLEC2LP0C7M8 214 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 AZGP1P25311 298 aaKnown RBP10.99□□□□□ -0.65
VPS33A-202ENST00000451053 CFPP27918 469 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 CAPZA1P52907 286 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 ZNF154Q13106 437 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 DYNC1I2Q13409 638 aaKnown RBP10.99□□□□□ -0.65
VPS33A-202ENST00000451053 HFEQ30201 348 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 ZNF404Q494X3 552 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 DDI2Q5TDH0 399 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 SHEQ5VZ18 495 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 MZT2AQ6P582 158 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 CLEC2AQ6UVW9 174 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 ZNF826PQ6ZT77 177 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 LHFPL2Q6ZUX7 228 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 C11orf53Q8IXP5 236 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 PNLDC1Q8NA58 520 aaKnown RBP10.99□□□□□ -0.65
VPS33A-202ENST00000451053 DNAAF1Q8NEP3 725 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 OR5A2Q8NGI9 324 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 OR6M1Q8NGM8 313 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 MCFD2Q8NI22 146 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 C10orf105Q8TEF2 133 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 Q96MF0 132 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 UQCC2Q9BRT2 126 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 SLIRPQ9GZT3 109 aaKnown RBP10.99□□□□□ -0.65
VPS33A-202ENST00000451053 MMP27Q9H306 513 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 METTL17Q9H7H0 456 aaPredicted RBP10.99□□□□□ -0.65
VPS33A-202ENST00000451053 CHODLQ9H9P2 273 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 PLGRKTQ9HBL7 147 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 DLL4Q9NR61 685 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 TMEM106BQ9NUM4 274 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 C1orf123Q9NWV4 160 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 CSMD2Q7Z408 3487 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 ARID1AO14497 2285 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 IGKV1-27A0A075B6S5 117 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 A0A0G2JK05 382 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 FAM230AA0A1W2PPH8 454 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 OR5B21A6NL26 309 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 A6NLC8 198 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 TMEM210A6NLX4 147 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 IFITM5A6NNB3 132 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 CYB5R3P00387 301 aaPredicted RBP10.98□□□□□ -0.65
VPS33A-202ENST00000451053 ADRA2CP18825 462 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 ZNF93P35789 620 aaPredicted RBP10.98□□□□□ -0.65
VPS33A-202ENST00000451053 RBP2P50120 134 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 FUT6P51993 359 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 OR10A3P58181 314 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 DSCR9P59020 149 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 GNG3P63215 75 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 HOXA4Q00056 320 aaPredicted RBP10.98□□□□□ -0.65
VPS33A-202ENST00000451053 RIN1Q13671 783 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 IDNKQ5T6J7 187 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 LINC00299Q6ZSB3 139 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 JAGN1Q8N5M9 183 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 OR51A2Q8NGJ7 313 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 Q8TCH9 128 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 BORCS8Q96FH0 119 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 BARHL1Q9BZE3 327 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 TLNRD1Q9H1K6 362 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 OR51I2Q9H344 312 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 FN3KRPQ9HA64 309 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 ABRACLQ9P1F3 81 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 DAPK2Q9UIK4 370 aa10.98□□□□□ -0.65
VPS33A-202ENST00000451053 PRRC2AP48634 2157 aaKnown RBP10.98□□□□□ -0.65
VPS33A-202ENST00000451053 SETXQ7Z333 2677 aaKnown RBP10.98□□□□□ -0.65
VPS33A-202ENST00000451053 DYSFO75923 2080 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 A0A075B6Q4 140 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 SMIM30A4D0T7 59 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 LRP5LA4QPB2 252 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 VWC2LB2RUY7 222 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 SLC17A2O00624 439 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 CDIPTO14735 213 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 CLPXO76031 633 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 CD37P11049 281 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 GIFP27352 417 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 ATP1B3P54709 279 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 CAV3P56539 151 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 SCAND1P57086 179 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 RAB11BQ15907 218 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 FAM76BQ5HYJ3 339 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 FAM201AQ5SY85 155 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 AVPI1Q5T686 147 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 WDR82Q6UXN9 313 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 RNF144BQ7Z419 303 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 NR2C2APQ86WQ0 139 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 SCCPDHQ8NBX0 429 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 OR11L1Q8NGX0 322 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 ERGIC1Q969X5 290 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 GPER1Q99527 375 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 PIMREGQ9BSJ6 248 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 BPESC1Q9GZL8 116 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 NXF2Q9GZY0 626 aaKnown RBP10.97□□□□□ -0.65
VPS33A-202ENST00000451053 STEAP1Q9UHE8 339 aa10.97□□□□□ -0.65
VPS33A-202ENST00000451053 hCG_1807616A0A1W2PRN6 198 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 CLDN25C9JDP6 229 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 C3orf80F5H4A9 247 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 TMEM178BH3BS89 294 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 NDUFS8O00217 210 aa10.96□□□□□ -0.65
VPS33A-202ENST00000451053 PPIHO43447 177 aaKnown RBP10.96□□□□□ -0.65
VPS33A-202ENST00000451053 RHBDL1O75783 438 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms