RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TMEM250H0YL14 139 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 SLC31A1O15431 190 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 B3GAT3O94766 335 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 LGALS2P05162 132 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 HNRNPA1P09651 372 aaKnown RBP eCLIP1.98□□□□□ -2.09
USP53-202ENST00000450251 ZNF16P17020 682 aaPredicted RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 PSMB10P40306 273 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 SLC6A12P48065 614 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 SLC37A1P57057 533 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 RPS23P62266 143 aaKnown RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 PLCXD2Q0VAA5 305 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 RAB32Q13637 225 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 VAX1Q5SQQ9 334 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 NBPF12Q5TAG4 269 aaPredicted RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 TEX29Q8N6K0 151 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 OR4D9Q8NGE8 314 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 MRPL30Q8TCC3 161 aaKnown RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 NUS1Q96E22 293 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 ALG14Q96F25 216 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 PCED1BQ96HM7 432 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 DERL3Q96Q80 235 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 WDR61Q9GZS3 305 aaKnown RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 LAT2Q9GZY6 243 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 CSTL1Q9H114 145 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 PARLQ9H300 379 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 IL21Q9HBE4 155 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 KLK11Q9UBX7 282 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 B4GALT6Q9UBX8 382 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 TUBD1Q9UJT1 453 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 HS3ST2Q9Y278 367 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 LIPGQ9Y5X9 500 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 DICER1Q9UPY3 1922 aaKnown RBP1.98□□□□□ -2.09
USP53-202ENST00000450251 CACNA1SQ13698 1873 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 BRWD3Q6RI45 1802 aa1.98□□□□□ -2.09
USP53-202ENST00000450251 TMEM272A0A1B0GTI8 110 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CTXND1A0A1B0GTU2 59 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CDC14CA4D256 554 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 A6NIN4 97 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CCL22O00626 93 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 MPPED1O15442 326 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ERI3O43414 337 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 TSPAN6O43657 245 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TSPAN2O60636 221 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 GCM2O75603 506 aaPredicted RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 S1PR2O95136 353 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 EOMESO95936 686 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TTRP02766 147 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SOD3P08294 240 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ANKRD34CP0C6C1 535 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 F3P13726 295 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TIMP2P16035 220 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 FSTP19883 344 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 AOAHP28039 575 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CSN1S1P47710 185 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 DGKEP52429 567 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CTXN1P60606 82 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 BTG2P78543 158 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 MZT1Q08AG7 82 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 KCNMB1Q16558 191 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 LDLRAD2Q5SZI1 272 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 LCE2CQ5TA81 110 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HES3Q5TGS1 186 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SDHAF4Q5VUM1 108 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ZFAND6Q6FIF0 208 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ZNF562Q6V9R5 426 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SLC36A1Q7Z2H8 476 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 WDFY1Q8IWB7 410 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OR2C3Q8N628 320 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ARIH2OSQ8N7S6 290 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 FAM169BQ8N8A8 192 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 GPR32P1Q8NGA4 272 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OR8B3Q8NGG8 313 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OR4D5Q8NGN0 318 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CLEC4CQ8WTT0 213 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 MUCL1Q96DR8 90 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 GRAMD2BQ96HH9 432 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 MRGPRX3Q96LB0 322 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TEX37Q96LM6 180 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TAAR6Q96RI8 345 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TMEM147Q9BVK8 224 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ULBP2Q9BZM5 246 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ELOVL3Q9HB03 270 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TMEM167BQ9NRX6 74 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TMEM30AQ9NV96 361 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ELOVL2Q9NXB9 296 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 KLK14Q9P0G3 267 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OR1A1Q9P1Q5 309 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 R4GMQ9 66 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ARFGEF1Q9Y6D6 1849 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 A0A087WV62 115 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 LOC102725191A0A1B0GVB3 256 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TMEM150BA6NC51 233 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 NKX2-6A6NCS4 301 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OR2W5A6NFC9 320 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OR5B21A6NL26 309 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CLDN5O00501 218 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SSSCA1O60232 199 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HIST1H2BKO60814 126 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HBZP02008 142 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HIST1H2BJP06899 126 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms