RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ANKRD55Q3KP44 614 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 NKAIN1Q4KMZ8 207 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 MRGPRGQ86SM5 289 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 CNTD2Q9H8S5 307 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 ARHGAP21Q5T5U3 1957 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 A0A087WUJ7 227 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 LOC102724200A0A096LPH7 203 aaPredicted RBP7.04□□□□□ -1.28
SMG1-202ENST00000446231 CD99P14209 185 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 AMTP48728 403 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 SPANXN5Q5MJ07 72 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 Q6ZSR6 202 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 NRXN3Q9Y4C0 1643 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 H3BML4 177 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 MASP2O00187 686 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 PRAMEF4O60810 478 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 MESTQ5EB52 335 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 KIR2DS1A0A191URI9 304 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 PRAMEF25A6NGN4 478 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 HCRTR1O43613 425 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 MOSPD3O75425 235 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 KIR2DS4P43632 304 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 KIR2DS1Q14954 304 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 ZNF595Q8IYB9 648 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 PTX4Q96A99 478 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 OR5AC2Q9NZP5 309 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 TMEM210A6NLX4 147 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 CT45A8P0DMV1 189 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 CT45A9P0DMV2 189 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 ZNF117Q03924 483 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 SGCBQ16585 318 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 CT45A2Q5DJT8 189 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 UBE2L5PA0A1B0GUS4 154 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 EFNB1P98172 346 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 SCGB2A2Q13296 93 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 KIRREL2Q6UWL6 708 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 PHOSPHO2Q8TCD6 241 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 ZNFX1Q9P2E3 1918 aaKnown RBP7.04□□□□□ -1.28
SMG1-202ENST00000446231 LOC102725191A0A1B0GVB3 256 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 TRAPPC2LH3BP13 241 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 CD8AP01732 235 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 IL2RGP31785 369 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 BTG2P78543 158 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 TGIF1Q15583 401 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 DNLZQ5SXM8 178 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 PINX1Q96BK5 328 aaKnown RBP7.04□□□□□ -1.28
SMG1-202ENST00000446231 RIMS4Q9H426 269 aaPredicted RBP7.04□□□□□ -1.28
SMG1-202ENST00000446231 APOBEC3BQ9UH17 382 aaKnown RBP7.04□□□□□ -1.28
SMG1-202ENST00000446231 RPH3ALQ9UNE2 315 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 HRASP01112 189 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 CST6Q15828 149 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 BIVMQ86UB2 503 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 MAML2Q8IZL2 1156 aaPredicted RBP7.04□□□□□ -1.28
SMG1-202ENST00000446231 ANGPTL4Q9BY76 406 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 A0A0G2JK05 382 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 HTR5AP47898 357 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 ADPRHP54922 357 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 ERV3-1Q14264 604 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 HLA-DRB5Q30154 266 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 RNASEKQ6P5S7 137 aaKnown RBP7.04□□□□□ -1.28
SMG1-202ENST00000446231 BTNL3Q6UXE8 466 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 NPEPL1Q8NDH3 523 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 CDC14BO60729 498 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 MYOGP15173 224 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 DTYMKP23919 212 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 IL13RA2Q14627 380 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 SLC24A4Q8NFF2 622 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 WFDC5Q8TCV5 224 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 GJE1A6NN92 205 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 FBLP22087 321 aaKnown RBP7.04□□□□□ -1.28
SMG1-202ENST00000446231 RPS23P62266 143 aaKnown RBP7.04□□□□□ -1.28
SMG1-202ENST00000446231 LANCL3Q6ZV70 420 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 CATSPERDQ86XM0 798 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 OR10J5Q8NHC4 309 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 MDKP21741 143 aaPredicted RBP7.04□□□□□ -1.28
SMG1-202ENST00000446231 ZNF764Q96H86 408 aaPredicted RBP7.04□□□□□ -1.28
SMG1-202ENST00000446231 RNF208Q9H0X6 261 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 ALKBH4Q9NXW9 302 aa7.04□□□□□ -1.28
SMG1-202ENST00000446231 FAM221AA4D161 298 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 FGF17O60258 216 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 HIKESHIQ53FT3 197 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 MRGPREQ86SM8 312 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 PPP1R3CQ9UQK1 317 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 TRBV5-7A0A0A0MS05 114 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 HYAL3O43820 417 aaPredicted RBP7.03□□□□□ -1.28
SMG1-202ENST00000446231 HOXC12P31275 282 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 GABRA4P48169 554 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 NR2C2APQ86WQ0 139 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 PRR18Q8N4B5 295 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 PIGCQ92535 297 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 FOXJ2Q9P0K8 574 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 ANKRD30BLA7E2S9 258 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 OR2J2O76002 312 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 IL33O95760 270 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 DEFB110Q30KQ9 67 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 OR2C3Q8N628 320 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 MFRPQ9BY79 579 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 DEFB126Q9BYW3 111 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 B4E171 279 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 SEC11BP0C7V7 166 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 TSEN54Q7Z6J9 526 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms