RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 SERTAD4Q9NUC0 356 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 MED29Q9NX70 200 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 OR1A1Q9P1Q5 309 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 CCDC18Q5T9S5 1454 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 IGLV3-22A0A075B6J6 115 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 RAD51CO43502 376 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 PVRP15151 417 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 PUDPQ08623 228 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 OXA1LQ15070 435 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 PAPPA-AS1Q5QFB9 102 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 HBMQ6B0K9 141 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 ZNF549Q6P9A3 640 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 ZNF567Q8N184 647 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 GPD1LQ8N335 351 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 CHST4Q8NCG5 386 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 SLC30A7Q8NEW0 376 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 SKA2Q8WVK7 121 aaPredicted RBP3.28□□□□□ -1.88
UBR3-206ENST00000444475 PPCDCQ96CD2 204 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 PPP3R2Q96LZ3 170 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 SCGB3A2Q96PL1 93 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 NEDD4LQ96PU5 975 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 CCDC32Q9BV29 185 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 SLC17A9Q9BYT1 436 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 REEP1Q9H902 201 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 WSB1Q9Y6I7 421 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 IQGAP3Q86VI3 1631 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 COL5A2P05997 1499 aaPredicted RBP3.28□□□□□ -1.88
UBR3-206ENST00000444475 SBF2Q86WG5 1849 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 ZNF814B7Z6K7 855 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 F5H5K5 113 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 H3BMQ9 156 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 RGS14O43566 566 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 KLF8O95600 359 aaPredicted RBP3.28□□□□□ -1.88
UBR3-206ENST00000444475 CCNE2O96020 404 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 HOXB7P09629 217 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 OR5AL1P0C617 328 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 IGHV4-31P0DP07 118 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 GM2AP17900 193 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 SEC61BP60468 96 aaKnown RBP3.28□□□□□ -1.88
UBR3-206ENST00000444475 DYNLL1P63167 89 aaKnown RBP3.28□□□□□ -1.88
UBR3-206ENST00000444475 RPL18AQ02543 176 aaKnown RBP3.28□□□□□ -1.88
UBR3-206ENST00000444475 ZNF169Q14929 603 aaPredicted RBP3.28□□□□□ -1.88
UBR3-206ENST00000444475 SHHQ15465 462 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 AWAT1Q58HT5 328 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 LINC00114Q6XXX2 140 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 ADAMTSL5Q6ZMM2 481 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 FAM231DQ6ZW35 169 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 SHFQ7M4L6 423 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 OR4N5Q8IXE1 308 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 ATPAF2Q8N5M1 289 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 OR13G1Q8NGZ3 307 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 PYROXD1Q8WU10 500 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 SRSF12Q8WXF0 261 aaKnown RBP3.28□□□□□ -1.88
UBR3-206ENST00000444475 CMTM7Q96FZ5 175 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 VPS25Q9BRG1 176 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 C7orf69Q9H7B7 122 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 RBM22Q9NW64 420 aaKnown RBP eCLIP3.28□□□□□ -1.88
UBR3-206ENST00000444475 MYRFQ9Y2G1 1151 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 MBD5Q9P267 1494 aa3.28□□□□□ -1.88
UBR3-206ENST00000444475 MYO5BQ9ULV0 1848 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 SMKR1H3BMG3 65 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 TIMM23O14925 209 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 EEDO75530 441 aaKnown RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 CLIC3O95833 236 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 SNRPBP14678 240 aaKnown RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 MYOD1P15172 320 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 GNLYP22749 145 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 RPS19P39019 145 aaKnown RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 CTRLP40313 264 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 TCTAP57738 103 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 BRWD1-AS2P59051 145 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 SLC25A11Q02978 314 aaKnown RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 POU3F1Q03052 451 aaPredicted RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 TWF1Q12792 350 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 HNRNPA0Q13151 305 aaKnown RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 EIF2B1Q14232 305 aaKnown RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 FNDC7Q5VTL7 733 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 GBGT1Q8N5D6 347 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 OR4K17Q8NGC6 315 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 MACROD1Q9BQ69 325 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 CDC42BPGQ6DT37 1551 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 A6NDN8 102 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 FOXI3A8MTJ6 420 aaPredicted RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 FAM107AO95990 144 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 PAK4O96013 591 aaPredicted RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 PSG1P11464 419 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 HSD17B1P14061 328 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 RPL3P39023 403 aaKnown RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 BAXQ07812 192 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 SNRNP35Q16560 246 aaKnown RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 IZUMO4Q1ZYL8 232 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 TECRLQ5HYJ1 363 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 C1orf195Q5TG92 126 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 TEX36Q5VZQ5 186 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 PNKDQ8N490 385 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 SSC4DQ8WTU2 575 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 DNAJC9Q8WXX5 260 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 ZMYND19Q96E35 227 aaPredicted RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 OR7D2Q96RA2 312 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 CDX2Q99626 313 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms