RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 VN1R2Q8NFZ6 395 aa9.15□□□□□ -0.94
SYNE2-206ENST00000441438 ZNF649Q9BS31 505 aa9.15□□□□□ -0.94
SYNE2-206ENST00000441438 MAP1LC3BQ9GZQ8 125 aa9.15□□□□□ -0.94
SYNE2-206ENST00000441438 TBX21Q9UL17 535 aa9.15□□□□□ -0.94
SYNE2-206ENST00000441438 CROCCQ5TZA2 2017 aa9.15□□□□□ -0.95
SYNE2-206ENST00000441438 A0A096LPK6 155 aa9.15□□□□□ -0.95
SYNE2-206ENST00000441438 SERINC4A6NH21 518 aa9.15□□□□□ -0.95
SYNE2-206ENST00000441438 H3BS24 57 aa9.15□□□□□ -0.95
SYNE2-206ENST00000441438 ZG16O60844 167 aa9.15□□□□□ -0.95
SYNE2-206ENST00000441438 CRYAAP02489 173 aa9.15□□□□□ -0.95
SYNE2-206ENST00000441438 HSD17B1P14061 328 aa9.15□□□□□ -0.95
SYNE2-206ENST00000441438 HIST1H1TP22492 207 aaPredicted RBP9.15□□□□□ -0.95
SYNE2-206ENST00000441438 DMRTC1Q5HYR2 192 aa9.15□□□□□ -0.95
SYNE2-206ENST00000441438 FAM219BQ5XKK7 198 aa9.15□□□□□ -0.95
SYNE2-206ENST00000441438 XAF1Q6GPH4 301 aa9.15□□□□□ -0.95
SYNE2-206ENST00000441438 LAMTOR1Q6IAA8 161 aa9.15□□□□□ -0.95
SYNE2-206ENST00000441438 LCN8Q6JVE9 175 aa9.15□□□□□ -0.95
SYNE2-206ENST00000441438 IL17FQ96PD4 163 aa9.15□□□□□ -0.95
SYNE2-206ENST00000441438 LINC00470Q9BZP3 86 aa9.15□□□□□ -0.95
SYNE2-206ENST00000441438 CASTOR2A6NHX0 329 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 YJEFN3A6XGL0 299 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 EFNA2O43921 213 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 FASP25445 335 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 ITGB7P26010 798 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 HTR1EP28566 365 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 RPL12P30050 165 aaKnown RBP9.14□□□□□ -0.95
SYNE2-206ENST00000441438 CX3CR1P49238 355 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 SNRPD1P62314 119 aaKnown RBP9.14□□□□□ -0.95
SYNE2-206ENST00000441438 SLC35B1P78383 322 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 AKR1C8PQ5T2L2 129 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 MFSD12Q6NUT3 480 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 DEFB106AQ8N104 65 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 Q8N1Y9 231 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 RXFP4Q8TDU9 374 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 CANT1Q8WVQ1 401 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 USP34Q70CQ2 3546 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 BBIP1A8MTZ0 92 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 SIRPB1O00241 398 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 APOC3P02656 99 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 GLRXP35754 106 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 P2RY1P47900 373 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 TSEN54Q7Z6J9 526 aaKnown RBP9.14□□□□□ -0.95
SYNE2-206ENST00000441438 HMGCLL1Q8TB92 370 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 ACTR3CQ9C0K3 210 aaPredicted RBP9.14□□□□□ -0.95
SYNE2-206ENST00000441438 SLC52A3Q9NQ40 469 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 NUDT5Q9UKK9 219 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 COL4A4P53420 1690 aaPredicted RBP9.14□□□□□ -0.95
SYNE2-206ENST00000441438 DENND4AQ7Z401 1863 aa9.14□□□□□ -0.95
SYNE2-206ENST00000441438 LOC102724200A0A096LPH7 203 aaPredicted RBP9.13□□□□□ -0.95
SYNE2-206ENST00000441438 AIPO00170 330 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 DEGS1O15121 323 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 ZNF134P52741 427 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 GABARAPL2P60520 117 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 DCDP81605 110 aaKnown RBP9.13□□□□□ -0.95
SYNE2-206ENST00000441438 OSR2Q8N2R0 312 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 SLC38A5Q8WUX1 472 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 LCN9Q8WX39 176 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 DNAJC30Q96LL9 226 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 CSF3RQ99062 836 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 SPANXA1Q9NS26 97 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 FBLN5Q9UBX5 448 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 V9GYS6 101 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 KIR2DS5A0A0G2JLQ3 304 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 A0A0G2JNG1 304 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 FAM72CH0Y354 149 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 J3KR12 359 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 HMGB3O15347 200 aaKnown RBP9.13□□□□□ -0.95
SYNE2-206ENST00000441438 TSPAN15O95858 294 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 CHRNB4P30926 498 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 KIR2DS5Q14953 304 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 FAM72AQ5TYM5 149 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 FAM72DQ6L9T8 149 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 FAM72BQ86X60 149 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 OR8I2Q8N0Y5 310 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 SLC16A11Q8NCK7 471 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 EFCAB11Q9BUY7 163 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 RLIMQ9NVW2 624 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 PRO0628Q9UI54 55 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 ERG28Q9UKR5 140 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 KLHDC2Q9Y2U9 406 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 SMIM35A0A1B0GVV1 85 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 DHRS12A0PJE2 317 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 OR7A17O14581 309 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 MT-CO3P00414 261 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 POLR2IP36954 125 aaKnown RBP9.13□□□□□ -0.95
SYNE2-206ENST00000441438 SMAGPQ0VAQ4 97 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 PPP1R1AQ13522 171 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 GPR18Q14330 331 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 GLYATQ6IB77 296 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 ARL14EPQ8N8R7 260 aaPredicted RBP9.13□□□□□ -0.95
SYNE2-206ENST00000441438 OR1N2Q8NGR9 330 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 OR13C6PQ8NH95 151 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 RNF141Q8WVD5 230 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 EEF1AKMT1Q8WVE0 214 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 SLC7A6Q92536 515 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 IMP4Q96G21 291 aaKnown RBP9.13□□□□□ -0.95
SYNE2-206ENST00000441438 SGK494Q96LW2 274 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 ST3GAL6Q9Y274 331 aa9.13□□□□□ -0.95
SYNE2-206ENST00000441438 RCL1Q9Y2P8 373 aaKnown RBP9.13□□□□□ -0.95
SYNE2-206ENST00000441438 FOXI3A8MTJ6 420 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms