RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 FGF20Q9NP95 211 aaPredicted RBP19.58■□□□□ 0.72
VARS-217ENST00000440048 ZNF69Q9UC07 566 aa19.58■□□□□ 0.72
VARS-217ENST00000440048 SLC7A11Q9UPY5 501 aa19.58■□□□□ 0.72
VARS-217ENST00000440048 FAM230AA0A1W2PPH8 454 aa19.57■□□□□ 0.72
VARS-217ENST00000440048 NKX6-3A6NJ46 265 aa19.57■□□□□ 0.72
VARS-217ENST00000440048 OR4C45A6NMZ5 311 aa19.57■□□□□ 0.72
VARS-217ENST00000440048 OR2AT4A6NND4 320 aa19.57■□□□□ 0.72
VARS-217ENST00000440048 NDUFB3O43676 98 aa19.57■□□□□ 0.72
VARS-217ENST00000440048 GATBO75879 557 aaKnown RBP19.57■□□□□ 0.72
VARS-217ENST00000440048 ECDO95905 644 aaPredicted RBP19.57■□□□□ 0.72
VARS-217ENST00000440048 LIPFP07098 398 aa19.57■□□□□ 0.72
VARS-217ENST00000440048 IGHV4-38-2P0DP08 117 aa19.57■□□□□ 0.72
VARS-217ENST00000440048 SELLP14151 372 aa19.57■□□□□ 0.72
VARS-217ENST00000440048 ALKBH1Q13686 389 aaKnown RBP19.57■□□□□ 0.72
VARS-217ENST00000440048 USP43Q70EL4 1123 aa19.57■□□□□ 0.72
VARS-217ENST00000440048 ANGPTL5Q86XS5 388 aa19.57■□□□□ 0.72
VARS-217ENST00000440048 PNLDC1Q8NA58 520 aaKnown RBP19.57■□□□□ 0.72
VARS-217ENST00000440048 SETD9Q8NE22 299 aa19.57■□□□□ 0.72
VARS-217ENST00000440048 ADAT3Q96EY9 351 aaPredicted RBP19.57■□□□□ 0.72
VARS-217ENST00000440048 SUCNR1Q9BXA5 334 aa19.57■□□□□ 0.72
VARS-217ENST00000440048 DCLRE1BQ9H816 532 aa19.57■□□□□ 0.72
VARS-217ENST00000440048 RASL12Q9NYN1 266 aa19.57■□□□□ 0.72
VARS-217ENST00000440048 IGHV3OR16-10A0A075B7F0 116 aa19.56■□□□□ 0.72
VARS-217ENST00000440048 SERPINA3P01011 423 aa19.56■□□□□ 0.72
VARS-217ENST00000440048 LIMS3P0CW19 117 aa19.56■□□□□ 0.72
VARS-217ENST00000440048 LIMS4P0CW20 117 aa19.56■□□□□ 0.72
VARS-217ENST00000440048 PGA5P0DJD9 388 aa19.56■□□□□ 0.72
VARS-217ENST00000440048 PSG2P11465 335 aa19.56■□□□□ 0.72
VARS-217ENST00000440048 MPZP25189 248 aa19.56■□□□□ 0.72
VARS-217ENST00000440048 ACP7Q6ZNF0 438 aa19.56■□□□□ 0.72
VARS-217ENST00000440048 CALHM1Q8IU99 346 aa19.56■□□□□ 0.72
VARS-217ENST00000440048 OR10AC1Q8NH08 325 aa19.56■□□□□ 0.72
VARS-217ENST00000440048 MED30Q96HR3 178 aa19.56■□□□□ 0.72
VARS-217ENST00000440048 C19orf24Q9BVV8 132 aa19.56■□□□□ 0.72
VARS-217ENST00000440048 JAM3Q9BX67 310 aa19.56■□□□□ 0.72
VARS-217ENST00000440048 RPUSD1Q9UJJ7 312 aaKnown RBP19.56■□□□□ 0.72
VARS-217ENST00000440048 POLDIP2Q9Y2S7 368 aa19.56■□□□□ 0.72
VARS-217ENST00000440048 IGKV1D-17A0A075B6S4 117 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 ZNF879B4DU55 563 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 E9PI62 339 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 SIGLEC5O15389 551 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 NOS1APO75052 506 aaPredicted RBP19.55■□□□□ 0.72
VARS-217ENST00000440048 ACAA1P09110 424 aaPredicted RBP19.55■□□□□ 0.72
VARS-217ENST00000440048 CAPGP40121 348 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 GABRA2P47869 451 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 HILS1P60008 231 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 IL13RA1P78552 427 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 IL18R1Q13478 541 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 DGUOKQ16854 277 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 TUSC1Q2TAM9 212 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 LRRC10Q5BKY1 277 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 BCL6BQ8N143 479 aaPredicted RBP19.55■□□□□ 0.72
VARS-217ENST00000440048 PP6455Q8WZ26 134 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 FGGYQ96C11 551 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 PKIBQ9C010 78 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 NKX1-2Q9UD57 310 aaPredicted RBP19.55■□□□□ 0.72
VARS-217ENST00000440048 ZNF222Q9UK12 451 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 HHLA2Q9UM44 414 aa19.55■□□□□ 0.72
VARS-217ENST00000440048 IGKV1-27A0A075B6S5 117 aa19.54■□□□□ 0.72
VARS-217ENST00000440048 TRAV40A0A0B4J280 105 aa19.54■□□□□ 0.72
VARS-217ENST00000440048 GPR37O15354 613 aa19.54■□□□□ 0.72
VARS-217ENST00000440048 FUT6P51993 359 aa19.54■□□□□ 0.72
VARS-217ENST00000440048 MRPL28Q13084 256 aaKnown RBP19.54■□□□□ 0.72
VARS-217ENST00000440048 SMIM21Q3B7S5 101 aa19.54■□□□□ 0.72
VARS-217ENST00000440048 ZNF676Q8N7Q3 588 aa19.54■□□□□ 0.72
VARS-217ENST00000440048 OR51A4Q8NGJ6 313 aa19.54■□□□□ 0.72
VARS-217ENST00000440048 NRIP2Q9BQI9 281 aa19.54■□□□□ 0.72
VARS-217ENST00000440048 PCGF1Q9BSM1 259 aa19.54■□□□□ 0.72
VARS-217ENST00000440048 H0YAE9 185 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 PLATP00750 562 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 SFTPBP07988 381 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 GNAO1P09471 354 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 MMP9P14780 707 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 ZNF20P17024 532 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 DCKP27707 260 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 ETV1P50549 477 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 GBX2P52951 348 aaPredicted RBP19.53■□□□□ 0.72
VARS-217ENST00000440048 IL24Q13007 206 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 CNN3Q15417 329 aaKnown RBP19.53■□□□□ 0.72
VARS-217ENST00000440048 UTS2BQ765I0 119 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 BATF2Q8N1L9 274 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 LY6G5BQ8NDX9 201 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 OR13C3Q8NGS6 347 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 WDFY2Q96P53 400 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 MS4A7Q9GZW8 240 aaPredicted RBP19.53■□□□□ 0.72
VARS-217ENST00000440048 SIRPDQ9H106 197 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 CNTD2Q9H8S5 307 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 SLC25A10Q9UBX3 287 aaPredicted RBP19.53■□□□□ 0.72
VARS-217ENST00000440048 HSPE1-MOB4S4R3N1 261 aa19.53■□□□□ 0.72
VARS-217ENST00000440048 IGKV1-9A0A0C4DH69 117 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 IRGMA1A4Y4 181 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 ERICH4A6NGS2 130 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 RFPL4AA6NLU0 287 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 RFPL4AL1F8VTS6 287 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 TOX4O94842 621 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 NXPH2O95156 264 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 ARF6P62330 175 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 METTL11BQ5VVY1 283 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 SIGLECL1Q8N7X8 197 aa19.52■□□□□ 0.72
VARS-217ENST00000440048 BORCS8Q96FH0 119 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms