RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 GABPB1Q06547 395 aaPredicted RBP8.68□□□□□ -1.02
MCF2L-216ENST00000439475 IKZF1Q13422 519 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 BLMHQ13867 455 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 SMIM21Q3B7S5 101 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 DMRTC1Q5HYR2 192 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 ZNF691Q5VV52 312 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 TMPRSS11AQ6ZMR5 421 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 RDH10Q8IZV5 341 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 PRSS35Q8N3Z0 413 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 OR52I1Q8NGK6 324 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 ANGPTL6Q8NI99 470 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 TRMT10AQ8TBZ6 339 aaKnown RBP8.68□□□□□ -1.02
MCF2L-216ENST00000439475 C22orf15Q8WYQ4 148 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 H1FXQ92522 213 aaKnown RBP8.68□□□□□ -1.02
MCF2L-216ENST00000439475 SEH1LQ96EE3 360 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 WDFY2Q96P53 400 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 SLC6A7Q99884 636 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 PCGF1Q9BSM1 259 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 CHST5Q9GZS9 411 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 FGF23Q9GZV9 251 aaPredicted RBP8.68□□□□□ -1.02
MCF2L-216ENST00000439475 WDR13Q9H1Z4 485 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 SMURF1Q9HCE7 757 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 ERVK13-1Q9NX77 482 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 FRRS1LQ9P0K9 344 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 SLC25A10Q9UBX3 287 aaPredicted RBP8.68□□□□□ -1.02
MCF2L-216ENST00000439475 ZNF69Q9UC07 566 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 RPUSD1Q9UJJ7 312 aaKnown RBP8.68□□□□□ -1.02
MCF2L-216ENST00000439475 MYRFQ9Y2G1 1151 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 KPTNQ9Y664 436 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 HSPE1-MOB4S4R3N1 261 aa8.68□□□□□ -1.02
MCF2L-216ENST00000439475 TRAV40A0A0B4J280 105 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 A0A1W2PPH5 198 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 SLC1A7O00341 560 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 SIGLEC5O15389 551 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 RGS9O75916 674 aaPredicted RBP8.67□□□□□ -1.02
MCF2L-216ENST00000439475 PGA5P0DJD9 388 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 PSG2P11465 335 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 NDUFB7P17568 137 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 ATF1P18846 271 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 MYL12AP19105 171 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 KIR3DL2P43630 455 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 CAPZA1P52907 286 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 CAV3P56539 151 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 IL24Q13007 206 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 UBE2V2Q15819 145 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 KLF17Q5JT82 389 aaPredicted RBP8.67□□□□□ -1.02
MCF2L-216ENST00000439475 FIP1L1Q6UN15 594 aaKnown RBP8.67□□□□□ -1.02
MCF2L-216ENST00000439475 ACP7Q6ZNF0 438 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 MKXQ8IYA7 352 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 FAM216BQ8N7L0 139 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 DNAAF1Q8NEP3 725 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 SPSB1Q96BD6 273 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 FGGYQ96C11 551 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 PELI1Q96FA3 418 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 DCTN5Q9BTE1 182 aa8.67□□□□□ -1.02
MCF2L-216ENST00000439475 ZMAT3Q9HA38 289 aaKnown RBP8.67□□□□□ -1.02
MCF2L-216ENST00000439475 FGF20Q9NP95 211 aaPredicted RBP8.67□□□□□ -1.02
MCF2L-216ENST00000439475 NIPBLQ6KC79 2804 aaeCLIP8.67□□□□□ -1.02
MCF2L-216ENST00000439475 TRBV2A0A0J9YWF9 115 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 A0A1W2PQ09 198 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 RFPL4AA6NLU0 287 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 TMEM212A6NML5 194 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 ANKRD65E5RJM6 399 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 RFPL4AL1F8VTS6 287 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 H0YAE9 185 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 CASQ2O14958 399 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-216ENST00000439475 SYNGR1O43759 233 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 PLATP00750 562 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 IGHV4-38-2P0DP08 117 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 AMY2BP19961 511 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 MPZP25189 248 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 PEX2P28328 305 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 PRDX2P32119 198 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 CAPGP40121 348 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 MTCP1P56278 107 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 NANOS3P60323 173 aaKnown RBP8.66□□□□□ -1.02
MCF2L-216ENST00000439475 SRSF2Q01130 221 aaKnown RBP8.66□□□□□ -1.02
MCF2L-216ENST00000439475 BAMBIQ13145 260 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 OGFRL1Q5TC84 451 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-216ENST00000439475 LHFPL2Q6ZUX7 228 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 C9orf139Q6ZV77 190 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 UTS2BQ765I0 119 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 ANGPTL5Q86XS5 388 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 SERPINA12Q8IW75 414 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 Q8IYB0 196 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 C8orf59Q8N0T1 100 aaPredicted RBP8.66□□□□□ -1.02
MCF2L-216ENST00000439475 ZNF561Q8N587 486 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 LY6G5BQ8NDX9 201 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 TMEM185AQ8NFB2 350 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 OR5D14Q8NGL3 314 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 OR13C3Q8NGS6 347 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 OR5AK2Q8NH90 309 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 TBC1D15Q8TC07 691 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 NPRL2Q8WTW4 380 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 FAM216AQ8WUB2 273 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 APH1BQ8WW43 257 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 GATAD2BQ8WXI9 593 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 SDSLQ96GA7 329 aa8.66□□□□□ -1.02
MCF2L-216ENST00000439475 GAFA1Q96PS6 74 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms