RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 DUX4L4P0CJ87 422 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 DUX4L5P0CJ88 424 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 DUX4L6P0CJ89 424 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 DUX4L7P0CJ90 424 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 PGA5P0DJD9 388 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 AMY2BP19961 511 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 PEX2P28328 305 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 BPIFB3P59826 476 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 GPR157Q5UAW9 335 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 DUX4L9Q6RFH8 374 aaPredicted RBP20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 C9orf139Q6ZV77 190 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 RDH10Q8IZV5 341 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 APH1BQ8WW43 257 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 CYGBQ8WWM9 190 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 WDFY2Q96P53 400 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 PCGF1Q9BSM1 259 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 CNTD2Q9H8S5 307 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 DUX4Q9UBX2 424 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 MYRFQ9Y2G1 1151 aa20.47■□□□□ 0.87
RAPGEF1-206ENST00000438647 NOS1APO75052 506 aaPredicted RBP20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 RPSAP08865 295 aaKnown RBP20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 ACAA1P09110 424 aaPredicted RBP20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 PSG2P11465 335 aa20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 MPZP25189 248 aa20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 GABRA2P47869 451 aa20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 FUT6P51993 359 aa20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 NANOS3P60323 173 aaKnown RBP20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 CNN3Q15417 329 aaKnown RBP20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 ZNF691Q5VV52 312 aa20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 SETD9Q8NE22 299 aa20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 OR52I1Q8NGK6 324 aa20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 TRMT10AQ8TBZ6 339 aaKnown RBP20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 HAVCR2Q8TDQ0 301 aa20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 GAFA1Q96PS6 74 aa20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 PKIBQ9C010 78 aa20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 ERVK13-1Q9NX77 482 aa20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 SLC25A10Q9UBX3 287 aaPredicted RBP20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 HHLA2Q9UM44 414 aa20.46■□□□□ 0.87
RAPGEF1-206ENST00000438647 IGHV3OR16-10A0A075B7F0 116 aa20.45■□□□□ 0.86
RAPGEF1-206ENST00000438647 FAM230AA0A1W2PPH8 454 aa20.45■□□□□ 0.86
RAPGEF1-206ENST00000438647 SYNGR1O43759 233 aa20.45■□□□□ 0.86
RAPGEF1-206ENST00000438647 MMP9P14780 707 aa20.45■□□□□ 0.86
RAPGEF1-206ENST00000438647 ALKBH1Q13686 389 aaKnown RBP20.45■□□□□ 0.86
RAPGEF1-206ENST00000438647 UBE2V2Q15819 145 aa20.45■□□□□ 0.86
RAPGEF1-206ENST00000438647 TUSC1Q2TAM9 212 aa20.45■□□□□ 0.86
RAPGEF1-206ENST00000438647 ACP7Q6ZNF0 438 aa20.45■□□□□ 0.86
RAPGEF1-206ENST00000438647 DHRSXQ8N5I4 330 aa20.45■□□□□ 0.86
RAPGEF1-206ENST00000438647 SIGLECL1Q8N7X8 197 aa20.45■□□□□ 0.86
RAPGEF1-206ENST00000438647 BORCS8Q96FH0 119 aa20.45■□□□□ 0.86
RAPGEF1-206ENST00000438647 KPTNQ9Y664 436 aa20.45■□□□□ 0.86
RAPGEF1-206ENST00000438647 IGKV1D-17A0A075B6S4 117 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 IRGMA1A4Y4 181 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 WBP4O75554 376 aaKnown RBP20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 NXPH2O95156 264 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 ZNF20P17024 532 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 CAV3P56539 151 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 ARF6P62330 175 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 IL24Q13007 206 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 PDCD1Q15116 288 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 DGUOKQ16854 277 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 CMTM4Q8IZR5 234 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 ZNF676Q8N7Q3 588 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 LY6G5BQ8NDX9 201 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 NPRL2Q8WTW4 380 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 FAM216AQ8WUB2 273 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 NRIP2Q9BQI9 281 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 DCTN5Q9BTE1 182 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 ZNF222Q9UK12 451 aa20.44■□□□□ 0.86
RAPGEF1-206ENST00000438647 ANKRD65E5RJM6 399 aa20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 SFTPBP07988 381 aa20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 SELLP14151 372 aa20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 IL18R1Q13478 541 aa20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 CALHM1Q8IU99 346 aa20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 BCL6BQ8N143 479 aaPredicted RBP20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 FGFRL1Q8N441 504 aa20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 H1FXQ92522 213 aaKnown RBP20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 SDSLQ96GA7 329 aa20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 ZNF488Q96MN9 340 aa20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 TBX15Q96SF7 602 aa20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 JAM3Q9BX67 310 aa20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 SIRPDQ9H106 197 aa20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 VCXQ9H320 206 aa20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 ISG20L2Q9H9L3 353 aaKnown RBP20.43■□□□□ 0.86
RAPGEF1-206ENST00000438647 OR4C45A6NMZ5 311 aa20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 CASQ2O14958 399 aaPredicted RBP20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 CLIC3O95833 236 aa20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 CCDC159P0C7I6 412 aa20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 NDUFB7P17568 137 aa20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 DCKP27707 260 aa20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 GBX2P52951 348 aaPredicted RBP20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 SMN1Q16637 294 aaKnown RBP20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 OGFRL1Q5TC84 451 aaPredicted RBP20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 UTS2BQ765I0 119 aa20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 ANGPTL5Q86XS5 388 aa20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 ZDHHC22Q8N966 263 aa20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 DNAAF1Q8NEP3 725 aa20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 TMEM185AQ8NFB2 350 aa20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 C8orf46Q8TAG6 207 aa20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 FGGYQ96C11 551 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms