RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 DCKP27707 260 aa13.48□□□□□ -0.25
SMPD4-207ENST00000435455 FUT6P51993 359 aa13.48□□□□□ -0.25
SMPD4-207ENST00000435455 GBX2P52951 348 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-207ENST00000435455 UBE2V2Q15819 145 aa13.48□□□□□ -0.25
SMPD4-207ENST00000435455 SMIM21Q3B7S5 101 aa13.48□□□□□ -0.25
SMPD4-207ENST00000435455 LRRC10Q5BKY1 277 aa13.48□□□□□ -0.25
SMPD4-207ENST00000435455 KLF17Q5JT82 389 aaPredicted RBP13.48□□□□□ -0.25
SMPD4-207ENST00000435455 BTN2A1Q7KYR7 527 aa13.48□□□□□ -0.25
SMPD4-207ENST00000435455 RDH10Q8IZV5 341 aa13.48□□□□□ -0.25
SMPD4-207ENST00000435455 FAM216BQ8N7L0 139 aa13.48□□□□□ -0.25
SMPD4-207ENST00000435455 ANGPTL6Q8NI99 470 aa13.48□□□□□ -0.25
SMPD4-207ENST00000435455 ZNF649Q9BS31 505 aa13.48□□□□□ -0.25
SMPD4-207ENST00000435455 PKIBQ9C010 78 aa13.48□□□□□ -0.25
SMPD4-207ENST00000435455 FAM230AA0A1W2PPH8 454 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 SIGLEC5O15389 551 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 FCN3O75636 299 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 ACAA1P09110 424 aaPredicted RBP13.47□□□□□ -0.25
SMPD4-207ENST00000435455 CCDC159P0C7I6 412 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 LIMS3P0CW19 117 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 LIMS4P0CW20 117 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 FGF12P61328 243 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 IL24Q13007 206 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 CNN3Q15417 329 aaKnown RBP13.47□□□□□ -0.25
SMPD4-207ENST00000435455 KRTAP24-1Q3LI83 254 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 ACP7Q6ZNF0 438 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 UTS2BQ765I0 119 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 C8orf59Q8N0T1 100 aaPredicted RBP13.47□□□□□ -0.25
SMPD4-207ENST00000435455 DNAAF1Q8NEP3 725 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 TRMT10AQ8TBZ6 339 aaKnown RBP13.47□□□□□ -0.25
SMPD4-207ENST00000435455 NPRL2Q8WTW4 380 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 DMRTB1Q96MA1 342 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 GAFA1Q96PS6 74 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 JMJD8Q96S16 334 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 SLC6A7Q99884 636 aa13.47□□□□□ -0.25
SMPD4-207ENST00000435455 ISG20L2Q9H9L3 353 aaKnown RBP13.47□□□□□ -0.25
SMPD4-207ENST00000435455 RPUSD1Q9UJJ7 312 aaKnown RBP13.47□□□□□ -0.25
SMPD4-207ENST00000435455 IGKV1D-17A0A075B6S4 117 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 A0A1B0GW55 424 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 TMEM212A6NML5 194 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 ZNF879B4DU55 563 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 SYNGR1O43759 233 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 NXPH2O95156 264 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 DUX4L2P0CJ85 424 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 DUX4L3P0CJ86 424 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 DUX4L4P0CJ87 422 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 DUX4L5P0CJ88 424 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 DUX4L6P0CJ89 424 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 DUX4L7P0CJ90 424 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 PSG2P11465 335 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 AMY2BP19961 511 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 PRKACBP22694 351 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 GABRA2P47869 451 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 SLC34A1Q06495 639 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 IKZF1Q13422 519 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 MED21Q13503 144 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 METTL11BQ5VVY1 283 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 DUX4L9Q6RFH8 374 aaPredicted RBP13.46□□□□□ -0.25
SMPD4-207ENST00000435455 TMPRSS11AQ6ZMR5 421 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 ANGPTL5Q86XS5 388 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 OR13C3Q8NGS6 347 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 SPATA3Q8NHX4 192 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 FGGYQ96C11 551 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 ADAT3Q96EY9 351 aaPredicted RBP13.46□□□□□ -0.25
SMPD4-207ENST00000435455 BORCS8Q96FH0 119 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 NRIP2Q9BQI9 281 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 MS4A7Q9GZW8 240 aaPredicted RBP13.46□□□□□ -0.25
SMPD4-207ENST00000435455 COMMD4Q9H0A8 199 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 DUX4Q9UBX2 424 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 ZNF69Q9UC07 566 aa13.46□□□□□ -0.25
SMPD4-207ENST00000435455 DIMT1Q9UNQ2 313 aaKnown RBP13.46□□□□□ -0.25
SMPD4-207ENST00000435455 CAB39Q9Y376 341 aaPredicted RBP13.46□□□□□ -0.25
SMPD4-207ENST00000435455 EXOSC1Q9Y3B2 195 aaKnown RBP13.46□□□□□ -0.25
SMPD4-207ENST00000435455 VENTXO95231 258 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 MYL12AP19105 171 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 RBP2P50120 134 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 ETV1P50549 477 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 ATP1B3P54709 279 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 CAV3P56539 151 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 HILS1P60008 231 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 SRSF2Q01130 221 aaKnown RBP13.45□□□□□ -0.26
SMPD4-207ENST00000435455 CALHM1Q8IU99 346 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 PHC2Q8IXK0 858 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 OR5AK2Q8NH90 309 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 ZFAND2BQ8WV99 257 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 SDSLQ96GA7 329 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 ZNF488Q96MN9 340 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 NEK6Q9HC98 313 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 CHCHD3Q9NX63 227 aaKnown RBP13.45□□□□□ -0.26
SMPD4-207ENST00000435455 SLC25A10Q9UBX3 287 aaPredicted RBP13.45□□□□□ -0.26
SMPD4-207ENST00000435455 NKX1-2Q9UD57 310 aaPredicted RBP13.45□□□□□ -0.26
SMPD4-207ENST00000435455 ZNF222Q9UK12 451 aa13.45□□□□□ -0.26
SMPD4-207ENST00000435455 TRAV40A0A0B4J280 105 aa13.44□□□□□ -0.26
SMPD4-207ENST00000435455 TRBV2A0A0J9YWF9 115 aa13.44□□□□□ -0.26
SMPD4-207ENST00000435455 EFCAB10A6NFE3 127 aa13.44□□□□□ -0.26
SMPD4-207ENST00000435455 ERICH4A6NGS2 130 aa13.44□□□□□ -0.26
SMPD4-207ENST00000435455 E9PI62 339 aa13.44□□□□□ -0.26
SMPD4-207ENST00000435455 TOX4O94842 621 aa13.44□□□□□ -0.26
SMPD4-207ENST00000435455 PLATP00750 562 aa13.44□□□□□ -0.26
SMPD4-207ENST00000435455 GNAO1P09471 354 aa13.44□□□□□ -0.26
SMPD4-207ENST00000435455 OCM2P0CE71 109 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms