RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 GDF1P27539 372 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 ZXDAP98168 799 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 PSG4Q00888 419 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 Q0VFX4 171 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 IL15RAQ13261 267 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 SMCO1Q147U7 214 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 CEACAM16Q2WEN9 425 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 ELP2Q6IA86 826 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 EIF5AL1Q6IS14 154 aaKnown RBP9.08□□□□□ -0.96
CD44-210ENST00000434472 RPUSD3Q6P087 351 aaKnown RBP9.08□□□□□ -0.96
CD44-210ENST00000434472 C6orf201Q7Z4U5 140 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 ROBO4Q8WZ75 1007 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 ZNF837Q96EG3 531 aaPredicted RBP9.08□□□□□ -0.96
CD44-210ENST00000434472 TAAR9Q96RI9 348 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 CMSS1Q9BQ75 279 aaKnown RBP9.08□□□□□ -0.96
CD44-210ENST00000434472 ZNF2Q9BSG1 426 aaPredicted RBP9.08□□□□□ -0.96
CD44-210ENST00000434472 DDA1Q9BW61 102 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 LINC00470Q9BZP3 86 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 WNT5BQ9H1J7 359 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 DECR2Q9NUI1 292 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 ANXA10Q9UJ72 324 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 MCTS1Q9ULC4 181 aaKnown RBP9.08□□□□□ -0.96
CD44-210ENST00000434472 A0A0G2JMM0 328 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 ZNF816-ZNF321PA0A0X1KG74 233 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 A0A1W2PPB8 328 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 A0A1W2PRS3 328 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 KIR3DP1A8MWS1 328 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 H0YIZ8 118 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 TERTO14746 1132 aaKnown RBP9.07□□□□□ -0.96
CD44-210ENST00000434472 PDGFBP01127 241 aaPredicted RBP9.07□□□□□ -0.96
CD44-210ENST00000434472 PI3P19957 117 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 ACKR3P25106 362 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 PTGER4P35408 488 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 BTN1A1Q13410 526 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 WIPI1Q5MNZ9 446 aaPredicted RBP9.07□□□□□ -0.96
CD44-210ENST00000434472 UNQ6126/PRO20091Q6UXV3 157 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 OSR2Q8N2R0 312 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 ZBTB44Q8NCP5 570 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 OR2AE1Q8NHA4 323 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 AKR7LQ8NHP1 331 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 MAFIPQ8WZ33 124 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 ARL11Q969Q4 196 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 ZNF775Q96BV0 537 aaPredicted RBP9.07□□□□□ -0.96
CD44-210ENST00000434472 SLC6A15Q9H2J7 730 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 CYTL1Q9NRR1 136 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 TMEM100Q9NV29 134 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 ABI3Q9P2A4 366 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 KCNIP3Q9Y2W7 256 aa9.07□□□□□ -0.96
CD44-210ENST00000434472 SDK1Q7Z5N4 2213 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 SZT2Q5T011 3432 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 hCG_38984A0A1B0GV85 526 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 CRYM-AS1A6NIL9 109 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 KNG1P01042 644 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 APOC3P02656 99 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 HOXB5P09067 269 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 OR5H8P0DN80 308 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 CD79AP11912 226 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 B4GALT1P15291 398 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 CHATP28329 748 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 RPS18P62269 152 aaKnown RBP9.06□□□□□ -0.96
CD44-210ENST00000434472 RAB32Q13637 225 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 OR8B8Q15620 311 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 ZNF585AQ6P3V2 769 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 DHRS11Q6UWP2 260 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 DBX2Q6ZNG2 339 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 DTX1Q86Y01 620 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 BPIFCQ8NFQ6 507 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 FNDC9Q8TBE3 224 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 OR10C1Q96KK4 312 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 FAM173AQ9BQD7 235 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 PRDM14Q9GZV8 571 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 ZFP57Q9NU63 452 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 ASF1BQ9NVP2 202 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 PARPBPQ9NWS1 579 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 P4HTMQ9NXG6 502 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 COQ3Q9NZJ6 369 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 B4GALT7Q9UBV7 327 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 AK3Q9UIJ7 227 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 PCDHB10Q9UN67 800 aa9.06□□□□□ -0.96
CD44-210ENST00000434472 IGKV3D-15A0A087WSY6 115 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FAM90A10PA6NDY2 464 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FAM90A18PA6NE21 464 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FAM90A16PA6NEW6 464 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FAM90A20PA6NIJ5 464 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FAM90A8PA6NJQ4 464 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FAM90A7PA6NKC0 464 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 ZNF850A8MQ14 1090 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FAM90A22PA8MWA6 464 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FAM90A12PA8MX19 464 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FAM90A5PA8MXJ8 464 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FAM90A23PA8MXZ1 464 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 PRSS44E7EML9 344 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 TSPAN4O14817 238 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 TPD52L2O43399 206 aaKnown RBP9.05□□□□□ -0.96
CD44-210ENST00000434472 SPRY1O43609 319 aaPredicted RBP9.05□□□□□ -0.96
CD44-210ENST00000434472 ANGPTL7O43827 346 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FCGR3AP08637 254 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 RFPL3SP0C7P2 107 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FAM90A15PP0C7V4 464 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FAM90A13PP0C7W8 464 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms