RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 PLA2G3Q9NZ20 509 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 PYCARD-AS1I3L0S3 204 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 CCL4P13236 92 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 CD79BP40259 229 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 EDDM3AQ14507 147 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 TMEM108Q6UXF1 575 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 CHST5Q9GZS9 411 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 DCAF10Q5QP82 559 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 TUBG2Q9NRH3 451 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 CEP250Q9BV73 2442 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 MEIKINA0A087WXM9 373 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 SSSCA1O60232 199 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 CSF2RBP32927 897 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 MARCH1Q8TCQ1 289 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 AKR1C1Q04828 323 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 OR52N4Q8NGI2 321 aa10.22□□□□□ -0.77
PTCH1-208ENST00000430669 RBPMSQ93062 196 aaKnown RBP10.22□□□□□ -0.77
PTCH1-208ENST00000430669 CHD3Q12873 2000 aaKnown RBP10.21□□□□□ -0.77
PTCH1-208ENST00000430669 HMSDA8MTL9 139 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 GCM2O75603 506 aaPredicted RBP10.21□□□□□ -0.77
PTCH1-208ENST00000430669 CCL3P10147 92 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 ARHGAP5-AS1Q96IT6 56 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 SLC26A1Q9H2B4 701 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 IFNA10P01566 189 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 NDUFB7P17568 137 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 OR3A4PP47883 348 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 ROM1Q03395 351 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 COMTD1Q86VU5 262 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 CCDC71Q8IV32 467 aaPredicted RBP10.21□□□□□ -0.77
PTCH1-208ENST00000430669 FSCN3Q9NQT6 498 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 TMEM210A6NLX4 147 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 DHRS7CA6NNS2 312 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 F6UZH7 168 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 PDCD6O75340 191 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 LTBRP36941 435 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 PSMB3P49720 205 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 PRDX4Q13162 271 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 HNF4GQ14541 408 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 UQCC3Q6UW78 93 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 HIST2H3AQ71DI3 136 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 H1FXQ92522 213 aaKnown RBP10.21□□□□□ -0.77
PTCH1-208ENST00000430669 RNF24Q9Y225 148 aa10.21□□□□□ -0.77
PTCH1-208ENST00000430669 BCL2L11O43521 198 aa10.21□□□□□ -0.78
PTCH1-208ENST00000430669 GZMKP49863 264 aa10.21□□□□□ -0.78
PTCH1-208ENST00000430669 PPP1R1CQ8WVI7 109 aa10.21□□□□□ -0.78
PTCH1-208ENST00000430669 CA10Q9NS85 328 aa10.21□□□□□ -0.78
PTCH1-208ENST00000430669 RAB7AP51149 207 aa10.21□□□□□ -0.78
PTCH1-208ENST00000430669 LRRC10Q5BKY1 277 aa10.21□□□□□ -0.78
PTCH1-208ENST00000430669 RFPL4AA6NLU0 287 aa10.21□□□□□ -0.78
PTCH1-208ENST00000430669 RFPL4AL1F8VTS6 287 aa10.21□□□□□ -0.78
PTCH1-208ENST00000430669 SIRPB1O00241 398 aa10.21□□□□□ -0.78
PTCH1-208ENST00000430669 CYTIPO60759 359 aa10.21□□□□□ -0.78
PTCH1-208ENST00000430669 IGKV3-11P04433 115 aa10.21□□□□□ -0.78
PTCH1-208ENST00000430669 SFTPCP11686 197 aa10.21□□□□□ -0.78
PTCH1-208ENST00000430669 GCNT2Q8N0V5 402 aa10.21□□□□□ -0.78
PTCH1-208ENST00000430669 PPP1R3CQ9UQK1 317 aa10.21□□□□□ -0.78
PTCH1-208ENST00000430669 SPNP16150 400 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 OMGP23515 440 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 ZNF626Q68DY1 528 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 C16orf47Q6ZP98 133 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-208ENST00000430669 NUDT16L1Q9BRJ7 211 aaKnown RBP10.2□□□□□ -0.78
PTCH1-208ENST00000430669 CXXC4Q9H2H0 198 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 OPRM1P35372 400 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 NKX6-1P78426 367 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-208ENST00000430669 C11orf87Q6NUJ2 197 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 YIPF5Q969M3 257 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 C4orf51C9J302 202 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 TMIGD3P0DMS9 266 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-208ENST00000430669 NUBP1P53384 320 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 MGAT2Q10469 447 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 EXTL1Q92935 676 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 OR2I1PQ8NGU4 316 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 PHYHIPLQ96FC7 376 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 MAP6Q96JE9 813 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 FKBP11Q9NYL4 201 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 NCKAP5O14513 1909 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 A0A1B0GV50 99 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 RPL12P30050 165 aaKnown RBP10.2□□□□□ -0.78
PTCH1-208ENST00000430669 INO80CQ6PI98 192 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-208ENST00000430669 SLC36A1Q7Z2H8 476 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 GPA33Q99795 319 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 NMES1Q9C002 83 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 UCNP55089 124 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 INSL4Q14641 139 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 LTC4SQ16873 150 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 FAM27BQ5VT28 67 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 BHLHA15Q7RTS1 189 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-208ENST00000430669 RTN4IP1Q8WWV3 396 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-208ENST00000430669 HEYLQ9NQ87 328 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-208ENST00000430669 KLF3P57682 345 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-208ENST00000430669 PRSS53Q2L4Q9 553 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 KCNRGQ8N5I3 272 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 OR5AP2Q8NGF4 316 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 PINX1Q96BK5 328 aaKnown RBP10.2□□□□□ -0.78
PTCH1-208ENST00000430669 ABHD1Q96SE0 405 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 KIAA1456Q9P272 454 aa10.2□□□□□ -0.78
PTCH1-208ENST00000430669 PCDH15Q96QU1 1955 aa10.19□□□□□ -0.78
PTCH1-208ENST00000430669 LRP3O75074 770 aa10.19□□□□□ -0.78
PTCH1-208ENST00000430669 SNTB1Q13884 538 aaKnown RBP10.19□□□□□ -0.78
PTCH1-208ENST00000430669 OR2H1Q9GZK4 316 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms