RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 LHX2P50458 406 aa11.91□□□□□ -0.5
THBS3-202ENST00000428962 ATP1B3P54709 279 aa11.91□□□□□ -0.5
THBS3-202ENST00000428962 OR1C1Q15619 314 aa11.91□□□□□ -0.5
THBS3-202ENST00000428962 PLEKHN1Q494U1 663 aaPredicted RBP11.91□□□□□ -0.5
THBS3-202ENST00000428962 SKA3Q8IX90 412 aa11.91□□□□□ -0.5
THBS3-202ENST00000428962 PDZD9Q8IXQ8 264 aa11.91□□□□□ -0.5
THBS3-202ENST00000428962 INO80EQ8NBZ0 244 aaPredicted RBP11.91□□□□□ -0.5
THBS3-202ENST00000428962 OR5M9Q8NGP3 310 aa11.91□□□□□ -0.5
THBS3-202ENST00000428962 SLC39A7Q92504 469 aa11.91□□□□□ -0.5
THBS3-202ENST00000428962 EMG1Q92979 244 aaKnown RBP11.91□□□□□ -0.5
THBS3-202ENST00000428962 VRK1Q99986 396 aaPredicted RBP11.91□□□□□ -0.5
THBS3-202ENST00000428962 PRDM14Q9GZV8 571 aa11.91□□□□□ -0.5
THBS3-202ENST00000428962 SLC25A32Q9H2D1 315 aa11.91□□□□□ -0.5
THBS3-202ENST00000428962 NUP50Q9UKX7 468 aa11.91□□□□□ -0.5
THBS3-202ENST00000428962 MCTS1Q9ULC4 181 aaKnown RBP11.91□□□□□ -0.5
THBS3-202ENST00000428962 C14orf166Q9Y224 244 aaKnown RBP11.91□□□□□ -0.5
THBS3-202ENST00000428962 SDK2Q58EX2 2172 aa11.91□□□□□ -0.5
THBS3-202ENST00000428962 EP300Q09472 2414 aaPredicted RBP11.9□□□□□ -0.5
THBS3-202ENST00000428962 ZNF816-ZNF321PA0A0X1KG74 233 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 EEF1E1-BLOC1S5C9J1V9 151 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 LRP3O75074 770 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 MMP7P09237 267 aaPredicted RBP11.9□□□□□ -0.5
THBS3-202ENST00000428962 SERPINF1P36955 418 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 FUT6P51993 359 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 OR8B8Q15620 311 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 SMUG1Q53HV7 270 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 NKAPLQ5M9Q1 402 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 RGS7BPQ6MZT1 257 aaPredicted RBP11.9□□□□□ -0.5
THBS3-202ENST00000428962 ASCL4Q6XD76 172 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 OVCH2Q7RTZ1 564 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 IQCF2Q8IXL9 164 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 ADAMTS17Q8TE56 1095 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 ST8SIA2Q92186 375 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 TMEM230Q96A57 120 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 MRPS24Q96EL2 167 aaKnown RBP11.9□□□□□ -0.5
THBS3-202ENST00000428962 PHYHIPLQ96FC7 376 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 SIGLEC12Q96PQ1 595 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 CHMP1AQ9HD42 196 aaPredicted RBP11.9□□□□□ -0.5
THBS3-202ENST00000428962 SDHAF2Q9NX18 166 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 IL36GQ9NZH8 169 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 OTOGLQ3ZCN5 2332 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 C13orf42A0A1B0GVH6 325 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 FIGNL2A6NMB9 653 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 CDK2AP1O14519 115 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 CRHP06850 196 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 PATE4P0C8F1 98 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 ZNF708P17019 499 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 DTYMKP23919 212 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 PSMB6P28072 239 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 CLDN18P56856 261 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 FAM3AP98173 230 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 PLGLB1Q02325 96 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 PABPC1L2AQ5JQF8 200 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 FAM209AQ5JX71 171 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 AADACL3Q5VUY0 350 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 CLEC18BQ6UXF7 455 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 C6orf201Q7Z4U5 140 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 PXT1Q8NFP0 134 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 FER1L6-AS2Q96M78 137 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 C1QTNF5Q9BXJ0 243 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 TTTY12Q9BZ98 90 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 WDR87Q6ZQQ6 2873 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 SPEGQ15772 3267 aa11.9□□□□□ -0.5
THBS3-202ENST00000428962 A0A1W2PNU3 283 aaPredicted RBP11.89□□□□□ -0.51
THBS3-202ENST00000428962 RNF222A6NCQ9 220 aa11.89□□□□□ -0.51
THBS3-202ENST00000428962 MFSD2BA6NFX1 497 aa11.89□□□□□ -0.51
THBS3-202ENST00000428962 ZNF587BE7ETH6 402 aa11.89□□□□□ -0.51
THBS3-202ENST00000428962 RPL36A-HNRNPH2H7BZ11 118 aa11.89□□□□□ -0.51
THBS3-202ENST00000428962 CDX4O14627 284 aaPredicted RBP11.89□□□□□ -0.51
THBS3-202ENST00000428962 PGAM2P15259 253 aa11.89□□□□□ -0.51
THBS3-202ENST00000428962 SRYQ05066 204 aa11.89□□□□□ -0.51
THBS3-202ENST00000428962 SLC9A3R2Q15599 337 aa11.89□□□□□ -0.51
THBS3-202ENST00000428962 TSPO2Q5TGU0 170 aa11.89□□□□□ -0.51
THBS3-202ENST00000428962 SPSB4Q96A44 273 aa11.89□□□□□ -0.51
THBS3-202ENST00000428962 RTBDNQ9BSG5 229 aaPredicted RBP11.89□□□□□ -0.51
THBS3-202ENST00000428962 RNF122Q9H9V4 155 aa11.89□□□□□ -0.51
THBS3-202ENST00000428962 MBD2Q9UBB5 411 aa11.89□□□□□ -0.51
THBS3-202ENST00000428962 KLF13Q9Y2Y9 288 aaPredicted RBP11.89□□□□□ -0.51
THBS3-202ENST00000428962 GVINP1Q7Z2Y8 2422 aa11.89□□□□□ -0.51
THBS3-202ENST00000428962 FAM166BA8MTA8 275 aa11.88□□□□□ -0.51
THBS3-202ENST00000428962 ZNF724A8MTY0 619 aa11.88□□□□□ -0.51
THBS3-202ENST00000428962 SDCBPO00560 298 aaPredicted RBP11.88□□□□□ -0.51
THBS3-202ENST00000428962 SPRY1O43609 319 aaPredicted RBP11.88□□□□□ -0.51
THBS3-202ENST00000428962 ANGPTL7O43827 346 aa11.88□□□□□ -0.51
THBS3-202ENST00000428962 RLN2P04090 185 aa11.88□□□□□ -0.51
THBS3-202ENST00000428962 ZP3P21754 424 aa11.88□□□□□ -0.51
THBS3-202ENST00000428962 ZNF92Q03936 586 aa11.88□□□□□ -0.51
THBS3-202ENST00000428962 SPEM2Q0P670 501 aa11.88□□□□□ -0.51
THBS3-202ENST00000428962 ATXN7L3Q14CW9 347 aaPredicted RBP11.88□□□□□ -0.51
THBS3-202ENST00000428962 RSPO4Q2I0M5 234 aaPredicted RBP11.88□□□□□ -0.51
THBS3-202ENST00000428962 PLCXD3Q63HM9 321 aa11.88□□□□□ -0.51
THBS3-202ENST00000428962 RPUSD3Q6P087 351 aaKnown RBP11.88□□□□□ -0.51
THBS3-202ENST00000428962 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.88□□□□□ -0.51
THBS3-202ENST00000428962 FGFBP3Q8TAT2 258 aa11.88□□□□□ -0.51
THBS3-202ENST00000428962 MAFIPQ8WZ33 124 aa11.88□□□□□ -0.51
THBS3-202ENST00000428962 POM121Q96HA1 1249 aa11.88□□□□□ -0.51
THBS3-202ENST00000428962 CXorf58Q96LI9 332 aa11.88□□□□□ -0.51
THBS3-202ENST00000428962 PRRG4Q9BZD6 226 aa11.88□□□□□ -0.51
THBS3-202ENST00000428962 BCO1Q9HAY6 547 aa11.88□□□□□ -0.51
THBS3-202ENST00000428962 IGKV1-27A0A075B6S5 117 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms