RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 TMIGD2Q96BF3 282 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 MSI2Q96DH6 328 aaKnown RBP12.2□□□□□ -0.46
SGCE-204ENST00000428696 PGLYRP3Q96LB9 341 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 OPALINQ96PE5 141 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 ACOT13Q9NPJ3 140 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 POLDIP2Q9Y2S7 368 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 CHD3Q12873 2000 aaKnown RBP12.2□□□□□ -0.46
SGCE-204ENST00000428696 IGKV1-27A0A075B6S5 117 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 CEACAM18A8MTB9 384 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 ZNF879B4DU55 563 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 J3QT63 122 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 ADAM20O43506 726 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 NXPH2O95156 264 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 LHBP01229 141 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 TMEM225BP0DP42 221 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 CALCBP10092 127 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 TGFBR2P37173 567 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 ACSM1Q08AH1 577 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 INSL4Q14641 139 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 TMEM155Q4W5P6 130 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 ARMCX4Q5H9R4 360 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 LHFPL2Q6ZUX7 228 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 ZNF367Q7RTV3 350 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 CEACAM19Q7Z692 300 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 LINC01356Q8N9X3 169 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 TLNRD1Q9H1K6 362 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 ELL3Q9HB65 397 aaPredicted RBP12.2□□□□□ -0.46
SGCE-204ENST00000428696 MIOXQ9UGB7 285 aa12.2□□□□□ -0.46
SGCE-204ENST00000428696 FAM157AC9JC47 383 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 TMPRSS2O15393 492 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 PHF1O43189 567 aaPredicted RBP12.19□□□□□ -0.46
SGCE-204ENST00000428696 SPRY1O43609 319 aaPredicted RBP12.19□□□□□ -0.46
SGCE-204ENST00000428696 MRPS14O60783 128 aaKnown RBP12.19□□□□□ -0.46
SGCE-204ENST00000428696 IGHV2-5P01817 119 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 TFF1P04155 84 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 ZNF16P17020 682 aaPredicted RBP12.19□□□□□ -0.46
SGCE-204ENST00000428696 RPS11P62280 158 aaKnown RBP eCLIP12.19□□□□□ -0.46
SGCE-204ENST00000428696 MLLT11Q13015 90 aaPredicted RBP12.19□□□□□ -0.46
SGCE-204ENST00000428696 TBCEQ15813 527 aaPredicted RBP12.19□□□□□ -0.46
SGCE-204ENST00000428696 NEDD8Q15843 81 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 ZNF404Q494X3 552 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 ZNF773Q6PK81 442 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 NLRC3Q7RTR2 1065 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 MKXQ8IYA7 352 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 MS4A15Q8N5U1 240 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 DNAAF1Q8NEP3 725 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 OR51A2Q8NGJ7 313 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 OR10Z1Q8NGY1 313 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 CCL13Q99616 98 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 NKX3-1Q99801 234 aaPredicted RBP12.19□□□□□ -0.46
SGCE-204ENST00000428696 FAM192AQ9GZU8 254 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 PATZ1Q9HBE1 687 aaKnown RBP12.19□□□□□ -0.46
SGCE-204ENST00000428696 NOX4Q9NPH5 578 aa12.19□□□□□ -0.46
SGCE-204ENST00000428696 ZNF469Q96JG9 3925 aaPredicted RBP12.18□□□□□ -0.46
SGCE-204ENST00000428696 TRBV5-5A0A0J9YX44 114 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 B4DSR2 109 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 TRAPPC2LH3BP13 241 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 ANGPTL7O43827 346 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 MAS1P04201 325 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 CPEP16870 476 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 SNU13P55769 128 aaKnown RBP12.18□□□□□ -0.46
SGCE-204ENST00000428696 SEC61A1P61619 476 aaKnown RBP12.18□□□□□ -0.46
SGCE-204ENST00000428696 RPS25P62851 125 aaKnown RBP12.18□□□□□ -0.46
SGCE-204ENST00000428696 GNB2P62879 340 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 IKZF1Q13422 519 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 KISS1Q15726 138 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 ESCO2Q56NI9 601 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 FAHD2BQ6P2I3 314 aaPredicted RBP12.18□□□□□ -0.46
SGCE-204ENST00000428696 RNF144BQ7Z419 303 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 FAM90A1Q86YD7 464 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 OR8B3Q8NGG8 313 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 OR52N4Q8NGI2 321 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 OR51F2Q8NH61 342 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 NEIL1Q96FI4 390 aaPredicted RBP12.18□□□□□ -0.46
SGCE-204ENST00000428696 FAHD2AQ96GK7 314 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 OR8B2Q96RD0 313 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 ISYNA1Q9NPH2 558 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 OR14J1Q9UGF5 321 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 LRCH1Q9Y2L9 728 aa12.18□□□□□ -0.46
SGCE-204ENST00000428696 MED13LQ71F56 2210 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 OR2AT4A6NND4 320 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 SRRM5B3KS81 715 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 TNFAIP8O95379 198 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 CD1AP06126 327 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 WNT2P09544 360 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 MUC1P15941 1255 aaPredicted RBP12.17□□□□□ -0.46
SGCE-204ENST00000428696 MAPK3P27361 379 aaPredicted RBP12.17□□□□□ -0.46
SGCE-204ENST00000428696 BDKRB2P30411 391 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 CFHR2P36980 270 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 PITPNBP48739 271 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 IL24Q13007 206 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 PDZK1IP1Q13113 114 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 GPR50Q13585 617 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 TPBGQ13641 420 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 KCTD21Q4G0X4 260 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 DDI2Q5TDH0 399 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 CSPG4Q6UVK1 2322 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 DCDC5Q6ZRR9 648 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 LURAP1LQ8IV03 231 aa12.17□□□□□ -0.46
SGCE-204ENST00000428696 PHC2Q8IXK0 858 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms