RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SLC25A33Q9BSK2 321 aa12.97□□□□□ -0.33
PTPN13-203ENST00000427191 FAM117AQ9C073 453 aa12.97□□□□□ -0.33
PTPN13-203ENST00000427191 TNFSF11O14788 317 aa12.97□□□□□ -0.33
PTPN13-203ENST00000427191 RIMKLAQ8IXN7 391 aa12.97□□□□□ -0.33
PTPN13-203ENST00000427191 LINC00615Q96LM1 132 aaPredicted RBP12.97□□□□□ -0.33
PTPN13-203ENST00000427191 ICAM5Q9UMF0 924 aa12.97□□□□□ -0.33
PTPN13-203ENST00000427191 IGHA1P01876 353 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 IGHA2P01877 340 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 OR10J1P30954 320 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 KHDC3LQ587J8 217 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 OR4S2Q8NH73 311 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 B9D1Q9UPM9 204 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 DLX1P56177 255 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 PKIAP61925 76 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 RBPMS2Q6ZRY4 209 aaKnown RBP12.96□□□□□ -0.33
PTPN13-203ENST00000427191 C20orf196Q8IYI0 205 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 SPACA9Q96E40 222 aaPredicted RBP12.96□□□□□ -0.33
PTPN13-203ENST00000427191 COL25A1Q9BXS0 654 aaPredicted RBP12.96□□□□□ -0.33
PTPN13-203ENST00000427191 MRPS16Q9Y3D3 137 aaKnown RBP12.96□□□□□ -0.33
PTPN13-203ENST00000427191 OR5B21A6NL26 309 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 ABLIM3O94929 683 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 F11P03951 625 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 CD226Q15762 336 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 TMEM65Q6PI78 240 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 TMEM37Q8WXS4 190 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 ESPL1Q14674 2120 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 HIST1H1EP10412 219 aaKnown RBP12.96□□□□□ -0.33
PTPN13-203ENST00000427191 LINC00303Q3SY05 128 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 RPEQ96AT9 228 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 ZNF576Q9H609 170 aa12.96□□□□□ -0.33
PTPN13-203ENST00000427191 CDRT15L2A8MXV6 281 aa12.96□□□□□ -0.34
PTPN13-203ENST00000427191 PYCARD-AS1I3L0S3 204 aa12.96□□□□□ -0.34
PTPN13-203ENST00000427191 CORTO00230 105 aa12.96□□□□□ -0.34
PTPN13-203ENST00000427191 PXNP49023 591 aaPredicted RBP12.96□□□□□ -0.34
PTPN13-203ENST00000427191 BPIFA4PQ86YQ2 179 aa12.96□□□□□ -0.34
PTPN13-203ENST00000427191 CDC42EP3Q9UKI2 254 aa12.96□□□□□ -0.34
PTPN13-203ENST00000427191 A0A087X0M5 115 aa12.96□□□□□ -0.34
PTPN13-203ENST00000427191 A0A1B0GX30 115 aa12.96□□□□□ -0.34
PTPN13-203ENST00000427191 DNASE2O00115 360 aaPredicted RBP12.96□□□□□ -0.34
PTPN13-203ENST00000427191 REC114Q7Z4M0 266 aa12.96□□□□□ -0.34
PTPN13-203ENST00000427191 TP53RKQ96S44 253 aa12.96□□□□□ -0.34
PTPN13-203ENST00000427191 IL36GQ9NZH8 169 aa12.96□□□□□ -0.34
PTPN13-203ENST00000427191 PLPP2O43688 288 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 SFT2D2O95562 160 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 RD3LP0DJH9 198 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 TCTN3Q6NUS6 607 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 C16orf52Q8NHV5 167 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 TCRBV5S2A0A599 114 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 hADV38S2A0JD32 116 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 SIGIRRQ6IA17 410 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 WFDC8Q8IUA0 241 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 CA13Q8N1Q1 262 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 TMEM208Q9BTX3 173 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 HIST1H1DP16402 221 aaKnown RBP12.95□□□□□ -0.34
PTPN13-203ENST00000427191 OR1N1Q8NGS0 311 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 OR13G1Q8NGZ3 307 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 TEX37Q96LM6 180 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 PTGFRP43088 359 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 RPL24P83731 157 aaKnown RBP12.95□□□□□ -0.34
PTPN13-203ENST00000427191 MTFP1Q9UDX5 166 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 ITGB4P16144 1822 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 RBFOX3A6NFN3 312 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 PRSS1P07477 247 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 HLA-DRB3P79483 266 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 PRDX4Q13162 271 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 ASTLQ6HA08 431 aaPredicted RBP12.95□□□□□ -0.34
PTPN13-203ENST00000427191 PRSS54Q6PEW0 395 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 ZBP1Q9H171 429 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 BRWD1Q9NSI6 2320 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 K7EQS6 105 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 DHHO43323 396 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 COX6CP09669 75 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 TGFBR1P36897 503 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 C21orf58P58505 322 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 HFEQ30201 348 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 LINC00596Q86U02 117 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 OR4D10Q8NGI6 311 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 MRPL37Q9BZE1 423 aaKnown RBP12.95□□□□□ -0.34
PTPN13-203ENST00000427191 AUNIPQ9H7T9 357 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 C3orf85A0A1B0GTC6 90 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 ACSM6Q6P461 480 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 ASCL5Q7RTU5 278 aa12.95□□□□□ -0.34
PTPN13-203ENST00000427191 PRKRAO75569 313 aaKnown RBP12.94□□□□□ -0.34
PTPN13-203ENST00000427191 P2RY1P47900 373 aa12.94□□□□□ -0.34
PTPN13-203ENST00000427191 SRSF9Q13242 221 aaKnown RBP eCLIP12.94□□□□□ -0.34
PTPN13-203ENST00000427191 DHRS2Q13268 280 aa12.94□□□□□ -0.34
PTPN13-203ENST00000427191 CARFQ8N187 725 aa12.94□□□□□ -0.34
PTPN13-203ENST00000427191 OR4A4PQ8NGN8 299 aa12.94□□□□□ -0.34
PTPN13-203ENST00000427191 ZNF707Q96C28 371 aaPredicted RBP12.94□□□□□ -0.34
PTPN13-203ENST00000427191 CHRNA10Q9GZZ6 450 aa12.94□□□□□ -0.34
PTPN13-203ENST00000427191 ZNFX1Q9P2E3 1918 aaKnown RBP12.94□□□□□ -0.34
PTPN13-203ENST00000427191 NRAPQ86VF7 1730 aa12.94□□□□□ -0.34
PTPN13-203ENST00000427191 A0A1W2PNV4 684 aa12.94□□□□□ -0.34
PTPN13-203ENST00000427191 LILRA5A6NI73 299 aa12.94□□□□□ -0.34
PTPN13-203ENST00000427191 SCGB1A1P11684 91 aa12.94□□□□□ -0.34
PTPN13-203ENST00000427191 KIR2DL1P43626 348 aaPredicted RBP12.94□□□□□ -0.34
PTPN13-203ENST00000427191 KIR2DL2P43627 348 aaPredicted RBP12.94□□□□□ -0.34
PTPN13-203ENST00000427191 JAG1P78504 1218 aa12.94□□□□□ -0.34
PTPN13-203ENST00000427191 DYRK2Q92630 601 aa12.94□□□□□ -0.34
PTPN13-203ENST00000427191 MISP3Q96FF7 219 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms