RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 OR5T2Q8NGG2 359 aa14.28□□□□□ -0.12
LMCD1-204ENST00000426878 FBLIM1Q8WUP2 373 aa14.28□□□□□ -0.12
LMCD1-204ENST00000426878 TMIGD2Q96BF3 282 aa14.28□□□□□ -0.12
LMCD1-204ENST00000426878 MED30Q96HR3 178 aa14.28□□□□□ -0.12
LMCD1-204ENST00000426878 OCEL1Q9H607 264 aa14.28□□□□□ -0.12
LMCD1-204ENST00000426878 NUP50Q9UKX7 468 aa14.28□□□□□ -0.12
LMCD1-204ENST00000426878 CAB39Q9Y376 341 aaPredicted RBP14.28□□□□□ -0.12
LMCD1-204ENST00000426878 A0A1B0GW55 424 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 TMEM212A6NML5 194 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 H0YJX3 145 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 SIGLEC5O15389 551 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 NDUFB3O43676 98 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 SYNGR1O43759 233 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 GNAO1P09471 354 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 CCDC159P0C7I6 412 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 DUX4L2P0CJ85 424 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 DUX4L3P0CJ86 424 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 DUX4L4P0CJ87 422 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 DUX4L5P0CJ88 424 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 DUX4L6P0CJ89 424 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 DUX4L7P0CJ90 424 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 PSG2P11465 335 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 FPR2P25090 351 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 GBX2P52951 348 aaPredicted RBP14.27□□□□□ -0.12
LMCD1-204ENST00000426878 GMFBP60983 142 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 IL24Q13007 206 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 CNN3Q15417 329 aaKnown RBP14.27□□□□□ -0.12
LMCD1-204ENST00000426878 DUX4L9Q6RFH8 374 aaPredicted RBP14.27□□□□□ -0.12
LMCD1-204ENST00000426878 ACP7Q6ZNF0 438 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 C8orf59Q8N0T1 100 aaPredicted RBP14.27□□□□□ -0.12
LMCD1-204ENST00000426878 FAM216BQ8N7L0 139 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 DNAAF1Q8NEP3 725 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 ZNF418Q8TF45 676 aaPredicted RBP14.27□□□□□ -0.12
LMCD1-204ENST00000426878 TFAP2CQ92754 450 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 ADAT3Q96EY9 351 aaPredicted RBP14.27□□□□□ -0.12
LMCD1-204ENST00000426878 NRIP2Q9BQI9 281 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 SNTG1Q9NSN8 517 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 DUX4Q9UBX2 424 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 RPUSD1Q9UJJ7 312 aaKnown RBP14.27□□□□□ -0.12
LMCD1-204ENST00000426878 ZNF222Q9UK12 451 aa14.27□□□□□ -0.12
LMCD1-204ENST00000426878 DIMT1Q9UNQ2 313 aaKnown RBP14.27□□□□□ -0.12
LMCD1-204ENST00000426878 IGKV1D-17A0A075B6S4 117 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 NKX6-3A6NJ46 265 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 E9PI62 339 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 ZFPL1O95159 310 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 ETV1P50549 477 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 ERVK11-1P61568 191 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 IL13RA1P78552 427 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 SMIM21Q3B7S5 101 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 CCDC58Q4VC31 144 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 LRRC10Q5BKY1 277 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 CALHM1Q8IU99 346 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 ZNF676Q8N7Q3 588 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 LY6G5BQ8NDX9 201 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 ST8SIA4Q92187 359 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 FGGYQ96C11 551 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 GAFA1Q96PS6 74 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 HES4Q9HCC6 221 aa14.26□□□□□ -0.13
LMCD1-204ENST00000426878 EXOSC1Q9Y3B2 195 aaKnown RBP14.26□□□□□ -0.13
LMCD1-204ENST00000426878 IGKV1-27A0A075B6S5 117 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 FAM230AA0A1W2PPH8 454 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 ERICH4A6NGS2 130 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 RNF212BA8MTL3 300 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 ZNF879B4DU55 563 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 PIPP12273 146 aaPredicted RBP14.25□□□□□ -0.13
LMCD1-204ENST00000426878 CAV3P56539 151 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 FGF12P61328 243 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 TMPRSS11AQ6ZMR5 421 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 ANGPTL5Q86XS5 388 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 OR51A4Q8NGJ6 313 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 OR10AC1Q8NH08 325 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 C8orf46Q8TAG6 207 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 TRMT10AQ8TBZ6 339 aaKnown RBP14.25□□□□□ -0.13
LMCD1-204ENST00000426878 RPS4Y2Q8TD47 263 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 BORCS8Q96FH0 119 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 SDSLQ96GA7 329 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 TMEM80Q96HE8 168 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 SUCNR1Q9BXA5 334 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 PLCXD1Q9NUJ7 323 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 DNHD1Q96M86 4753 aa14.25□□□□□ -0.13
LMCD1-204ENST00000426878 IGKV1-9A0A0C4DH69 117 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 PLATP00750 562 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 MT-ND2P03891 347 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 MMP9P14780 707 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 ZNF20P17024 532 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 ATF1P18846 271 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 MYL12AP19105 171 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 PRKACBP22694 351 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 RBP2P50120 134 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 HILS1P60008 231 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 IKZF1Q13422 519 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 DGUOKQ16854 277 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 KRTAP24-1Q3LI83 254 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 LAIR2Q6ISS4 152 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 RPL22L1Q6P5R6 122 aaKnown RBP14.24□□□□□ -0.13
LMCD1-204ENST00000426878 C9orf139Q6ZV77 190 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 BPIFB2Q8N4F0 458 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 OR13C3Q8NGS6 347 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 OR5AK2Q8NH90 309 aa14.24□□□□□ -0.13
LMCD1-204ENST00000426878 SPATA3Q8NHX4 192 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms