RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 SLAMF9Q96A28 289 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 CENPOQ9BU64 300 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 METTL9Q9H1A3 318 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 OR51I2Q9H344 312 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 METTL17Q9H7H0 456 aaPredicted RBP7.16□□□□□ -1.26
TRIM48-201ENST00000417545 CHODLQ9H9P2 273 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 ZNF701Q9NV72 531 aaPredicted RBP7.16□□□□□ -1.26
TRIM48-201ENST00000417545 GLS2Q9UI32 602 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 MRPS28Q9Y2Q9 187 aaKnown RBP7.16□□□□□ -1.26
TRIM48-201ENST00000417545 NPTNQ9Y639 398 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 V9GY05 133 aa7.16□□□□□ -1.26
TRIM48-201ENST00000417545 PPIAL4EA0A075B759 164 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 A0A1B0GWJ7 208 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 NKX6-3A6NJ46 265 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 PPIAL4DF5H284 164 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 AKR7A2O43488 359 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 ANGPTL7O43827 346 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 KDM4BO94953 1096 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 GABARAPO95166 117 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 HTR3BO95264 441 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 HEXAP06865 529 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 ROS1P08922 2347 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 UBBP0CG47 229 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 PPIAL4FP0DN26 164 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 SERPINA2P20848 420 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 COL8A2P25067 703 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 HTR2CP28335 458 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 CD80P33681 288 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 SDC2P34741 201 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 SOX6P35712 828 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 OR3A4PP47883 348 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 CAPZA1P52907 286 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 ART1P52961 327 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 TMBIM6P55061 237 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 SNU13P55769 128 aaKnown RBP7.15□□□□□ -1.27
TRIM48-201ENST00000417545 MRPS11P82912 194 aaKnown RBP7.15□□□□□ -1.27
TRIM48-201ENST00000417545 PDZK1IP1Q13113 114 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 BLMHQ13867 455 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 GPR176Q14439 515 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 CLEC12BQ2HXU8 276 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 Q5PR19 223 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 HES5Q5TA89 166 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 KRT74Q7RTS7 529 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 LRRTM1Q86UE6 522 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 CALHM1Q8IU99 346 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 CROCCP3Q8IVE0 287 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 CDH26Q8IXH8 852 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 OR6M1Q8NGM8 313 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 OR10Z1Q8NGY1 313 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 AQP3Q92482 292 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 MBD6Q96DN6 1003 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 CEP19Q96LK0 163 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 BCL7BQ9BQE9 202 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 UQCC2Q9BRT2 126 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 CST11Q9H112 138 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 RNF167Q9H6Y7 350 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 NDUFA13Q9P0J0 144 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 PCDHB10Q9UN67 800 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 PPIAL4AQ9Y536 164 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 CACNG2Q9Y698 323 aa7.15□□□□□ -1.27
TRIM48-201ENST00000417545 IGKV1-27A0A075B6S5 117 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 TRAV38-1A0A0B4J264 116 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 SMIM31A0A1B0GVY4 71 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 C3orf80F5H4A9 247 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 TMEM178BH3BS89 294 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 NDUFS8O00217 210 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 SLC22A1O15245 554 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 SYNGR1O43759 233 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 ZNF780AO75290 641 aaPredicted RBP7.14□□□□□ -1.27
TRIM48-201ENST00000417545 CRTAPO75718 401 aaPredicted RBP7.14□□□□□ -1.27
TRIM48-201ENST00000417545 RHBDL1O75783 438 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 PRKACAP17612 351 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 PTGFRP43088 359 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 BMXP51813 675 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 TMEM33P57088 247 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 NCS1P62166 190 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 P2RY14Q15391 338 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 MICBQ29980 383 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 ZNF181Q2M3W8 571 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 SLC22A6Q4U2R8 563 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 SPRNQ5BIV9 151 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 AVPI1Q5T686 147 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 IDNKQ5T6J7 187 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 ZNF529Q6P280 563 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 GLIPR1L1Q6UWM5 242 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 WDR82Q6UXN9 313 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 SAXO1Q8IYX7 474 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 MUC20Q8N307 709 aaPredicted RBP7.14□□□□□ -1.27
TRIM48-201ENST00000417545 ZSCAN4Q8NAM6 433 aaPredicted RBP7.14□□□□□ -1.27
TRIM48-201ENST00000417545 POC1AQ8NBT0 407 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 DEFB108BQ8NET1 73 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 Q8TCH9 128 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 YIPF5Q969M3 257 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 ZNF488Q96MN9 340 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 NKX3-1Q99801 234 aaPredicted RBP7.14□□□□□ -1.27
TRIM48-201ENST00000417545 GAL3ST1Q99999 423 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 FGF23Q9GZV9 251 aaPredicted RBP7.14□□□□□ -1.27
TRIM48-201ENST00000417545 NAA50Q9GZZ1 169 aaKnown RBP7.14□□□□□ -1.27
TRIM48-201ENST00000417545 DCSTAMPQ9H295 470 aa7.14□□□□□ -1.27
TRIM48-201ENST00000417545 PPIL3Q9H2H8 161 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms