RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 HAAOP46952 286 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 OR3A4PP47883 348 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 CAV3P56539 151 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 SCAND1P57086 179 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 CCL8P80075 99 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 PRAMEF6Q5VXH4 476 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 ELP2Q6IA86 826 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 ANGPTL5Q86XS5 388 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 TBC1D15Q8TC07 691 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 KCTD12Q96CX2 325 aaKnown RBP11.21□□□□□ -0.61
CNN3-203ENST00000415017 SLIRPQ9GZT3 109 aaKnown RBP11.21□□□□□ -0.61
CNN3-203ENST00000415017 RAB1BQ9H0U4 201 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 TPK1Q9H3S4 243 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 RHOFQ9HBH0 211 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 HES4Q9HCC6 221 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 MTCH1Q9NZJ7 389 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 CCDC59Q9P031 241 aaKnown RBP11.21□□□□□ -0.61
CNN3-203ENST00000415017 GHRLQ9UBU3 117 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 STEAP1Q9UHE8 339 aa11.21□□□□□ -0.61
CNN3-203ENST00000415017 CSMD2Q7Z408 3487 aa11.21□□□□□ -0.62
CNN3-203ENST00000415017 ARID1AO14497 2285 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.2□□□□□ -0.62
CNN3-203ENST00000415017 IFNL4K9M1U5 179 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 CDIPTO14735 213 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 SYNGR1O43759 233 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 NOL3O60936 208 aaKnown RBP11.2□□□□□ -0.62
CNN3-203ENST00000415017 RP2O75695 350 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 RHBDL1O75783 438 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 KDM4BO94953 1096 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 F12P00748 615 aaPredicted RBP11.2□□□□□ -0.62
CNN3-203ENST00000415017 PGA5P0DJD9 388 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 RORCP51449 518 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 MXD1Q05195 221 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 HAGHLQ6PII5 290 aaPredicted RBP11.2□□□□□ -0.62
CNN3-203ENST00000415017 JAGN1Q8N5M9 183 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 GCSAMQ8N6F7 178 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 POC1AQ8NBT0 407 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 NRIP2Q9BQI9 281 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 MRI1Q9BV20 369 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 EGLN1Q9GZT9 426 aa11.2□□□□□ -0.62
CNN3-203ENST00000415017 SEBOXQ9HB31 216 aaPredicted RBP11.2□□□□□ -0.62
CNN3-203ENST00000415017 A0A075B6Q4 140 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 CCDC160A6NGH7 325 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 TMEM14DPA8MWL7 114 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 SRRM5B3KS81 715 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 GRPP07492 148 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 UBBP0CG47 229 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 CALCBP10092 127 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 SLC2A2P11168 524 aaPredicted RBP11.19□□□□□ -0.62
CNN3-203ENST00000415017 ZNF182P17025 639 aaPredicted RBP11.19□□□□□ -0.62
CNN3-203ENST00000415017 CDKN1AP38936 164 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 EFNA4P52798 201 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 CAPZA1P52907 286 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 HNRNPA0Q13151 305 aaKnown RBP11.19□□□□□ -0.62
CNN3-203ENST00000415017 NHLRC3Q5JS37 347 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 ZNF826PQ6ZT77 177 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 SLC25A26Q70HW3 274 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 MKXQ8IYA7 352 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 PNLDC1Q8NA58 520 aaKnown RBP11.19□□□□□ -0.62
CNN3-203ENST00000415017 OR51F2Q8NH61 342 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 TNFAIP8L1Q8WVP5 186 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 PTX4Q96A99 478 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 RFT1Q96AA3 541 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 MBD6Q96DN6 1003 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 POM121Q96HA1 1249 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 CCL19Q99731 98 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 NKX3-1Q99801 234 aaPredicted RBP11.19□□□□□ -0.62
CNN3-203ENST00000415017 FN3KRPQ9HA64 309 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 SAP30LQ9HAJ7 183 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 MRPS28Q9Y2Q9 187 aaKnown RBP11.19□□□□□ -0.62
CNN3-203ENST00000415017 A3GALT2U3KPV4 340 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 NAV2Q8IVL1 2488 aa11.19□□□□□ -0.62
CNN3-203ENST00000415017 SMIM30A4D0T7 59 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 F8VVB4 439 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 F8VWA3 439 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 SPRY1O43609 319 aaPredicted RBP11.18□□□□□ -0.62
CNN3-203ENST00000415017 BPNT1O95861 308 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 VSIG8P0DPA2 414 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 RANBP1P43487 201 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 NPBWR2P48146 333 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 RAB11BQ15907 218 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 DGUOKQ16854 277 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 CNPY1Q3B7I2 92 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 C2orf76Q3KRA6 126 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 GLIPR1L1Q6UWM5 242 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 DNM1P46Q6ZS02 220 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 OR2W3Q7Z3T1 314 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 CDH24Q86UP0 819 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 MOGAT3Q86VF5 341 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 TGIF2LYQ8IUE0 185 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 OR51T1Q8NGJ9 327 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 ZNF671Q8TAW3 534 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 NRGNQ92686 78 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 YIPF5Q969M3 257 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 FAM3DQ96BQ1 224 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 VRK1Q99986 396 aaPredicted RBP11.18□□□□□ -0.62
CNN3-203ENST00000415017 GSX2Q9BZM3 304 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 CXorf56Q9H5V9 222 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 DECR2Q9NUI1 292 aa11.18□□□□□ -0.62
CNN3-203ENST00000415017 C1orf123Q9NWV4 160 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms