RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 AWAT2Q6E213 333 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 HAGHLQ6PII5 290 aaPredicted RBP12.07□□□□□ -0.48
SF3B1-204ENST00000414963 GLIPR1L1Q6UWM5 242 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 C20orf204Q6ZNR8 217 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 SLC25A26Q70HW3 274 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 OR2W3Q7Z3T1 314 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 CDH24Q86UP0 819 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 OR51F2Q8NH61 342 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 ZNF671Q8TAW3 534 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 IGFBPL1Q8WX77 278 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 OR2V2Q96R30 315 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 CLEC4MQ9H2X3 399 aaPredicted RBP12.07□□□□□ -0.48
SF3B1-204ENST00000414963 DYNLRB1Q9NP97 96 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 PKDREJQ9NTG1 2253 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 ICE1Q9Y2F5 2266 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 A0A0B4J203 849 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 IGKV1-12A0A0C4DH73 117 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 TMEM14DPA8MWL7 114 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 CTDSP2O14595 271 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 ZNF780AO75290 641 aaPredicted RBP12.06□□□□□ -0.48
SF3B1-204ENST00000414963 KDM4BO94953 1096 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 CYB5AP00167 134 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 IGKV1D-12P01611 117 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 GRPP07492 148 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 VSIG8P0DPA2 414 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 RAB6AP20340 208 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 POU3F4P49335 361 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 ELP2Q6IA86 826 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 OR5D18Q8NGL1 313 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 KCNG3Q8TAE7 436 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 LGALS14Q8TCE9 139 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 Q8TCH9 128 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 MRPS24Q96EL2 167 aaKnown RBP12.06□□□□□ -0.48
SF3B1-204ENST00000414963 POM121Q96HA1 1249 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 EGLN1Q9GZT9 426 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 METTL9Q9H1A3 318 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 UBTD1Q9HAC8 227 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 SMURF1Q9HCE7 757 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 PCDHB16Q9NRJ7 776 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 COMMD3Q9UBI1 195 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 ING4Q9UNL4 249 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 POLDIP2Q9Y2S7 368 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 PEX16Q9Y5Y5 336 aa12.06□□□□□ -0.48
SF3B1-204ENST00000414963 TMEM272A0A1B0GTI8 110 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 H7C417 338 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 CDIPTO14735 213 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 SPRY1O43609 319 aaPredicted RBP12.05□□□□□ -0.48
SF3B1-204ENST00000414963 SYNGR1O43759 233 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 ANGPTL7O43827 346 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 TNFRSF1AP19438 455 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 ERVK11-1P61568 191 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 MPPED2Q15777 294 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 SPRNQ5BIV9 151 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 PRAMEF6Q5VXH4 476 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 WDR82Q6UXN9 313 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 ZCCHC24Q8N2G6 241 aaKnown RBP12.05□□□□□ -0.48
SF3B1-204ENST00000414963 OR6Q1Q8NGQ2 317 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 OR5H6Q8NGV6 325 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 OR10Z1Q8NGY1 313 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 ITLN1Q8WWA0 313 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 S100A13Q99584 98 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 NRIP2Q9BQI9 281 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 ABCG5Q9H222 651 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 FN3KRPQ9HA64 309 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 GCM1Q9NP62 436 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 MTCH1Q9NZJ7 389 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 RAB22AQ9UL26 194 aa12.05□□□□□ -0.48
SF3B1-204ENST00000414963 RAI1Q7Z5J4 1906 aaPredicted RBP12.05□□□□□ -0.48
SF3B1-204ENST00000414963 IFNL4K9M1U5 179 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 OVOL3O00110 214 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 RHBDL1O75783 438 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 PLATP00750 562 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 APOA1P02647 267 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 PGA5P0DJD9 388 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 COL8A1P27658 744 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 SSTR2P30874 369 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 PMELP40967 661 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 CCL8P80075 99 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 UNC119Q13432 240 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 RSU1Q15404 277 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 FAM189A2Q15884 450 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 ZNF181Q2M3W8 571 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 SLC22A6Q4U2R8 563 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 Q8IYB0 196 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 SAMD12Q8N8I0 201 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 POC1AQ8NBT0 407 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 CEP19Q96LK0 163 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 WDFY2Q96P53 400 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 C6orf62Q9GZU0 229 aaPredicted RBP12.04□□□□□ -0.48
SF3B1-204ENST00000414963 RAB1BQ9H0U4 201 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 CST11Q9H112 138 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 MIXL1Q9H2W2 232 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 DECR2Q9NUI1 292 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 LAMP3Q9UQV4 416 aa12.04□□□□□ -0.48
SF3B1-204ENST00000414963 TRAPPC2LH3BP13 241 aa12.03□□□□□ -0.48
SF3B1-204ENST00000414963 CDC14BO60729 498 aa12.03□□□□□ -0.48
SF3B1-204ENST00000414963 HPGDSO60760 199 aa12.03□□□□□ -0.48
SF3B1-204ENST00000414963 LHBP01229 141 aa12.03□□□□□ -0.48
SF3B1-204ENST00000414963 SFTPBP07988 381 aa12.03□□□□□ -0.48
SF3B1-204ENST00000414963 GTF2F2P13984 249 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms