RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SMCO4Q9NRQ5 59 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 TEX51A0A1B0GUA7 166 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 CTF1Q16619 201 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 MESTQ5EB52 335 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 BTNL3Q6UXE8 466 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 KLK11Q9UBX7 282 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 BOLA1Q9Y3E2 137 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 CASP8AP2Q9UKL3 1982 aa15.32■□□□□ 0.04
PHRF1-202ENST00000413872 HOXD11P31277 338 aaPredicted RBP15.31■□□□□ 0.04
PHRF1-202ENST00000413872 TMEM182Q6ZP80 229 aaPredicted RBP15.31■□□□□ 0.04
PHRF1-202ENST00000413872 AKIP1Q9NQ31 210 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 PILRAQ9UKJ1 303 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 RGPD3A6NKT7 1758 aaPredicted RBP15.31■□□□□ 0.04
PHRF1-202ENST00000413872 A0A0A6YYJ9 748 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 CLEC18AA5D8T8 446 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 HRKO00198 91 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 TRAF3IP2O43734 574 aaPredicted RBP15.31■□□□□ 0.04
PHRF1-202ENST00000413872 RAB5CP51148 216 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 FAAP20Q6NZ36 180 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 CCDC190Q86UF4 302 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 UBAC2Q8NBM4 344 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 CLEC18CQ8NCF0 446 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 OR52N4Q8NGI2 321 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 GSX2Q9BZM3 304 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 MED9Q9NWA0 146 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 TIGITQ495A1 244 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 ARHGAP5-AS1Q96IT6 56 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 MS4A5Q9H3V2 200 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 GPR35Q9HC97 309 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 HES4Q9HCC6 221 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 PLEKHB1Q9UF11 243 aaPredicted RBP15.31■□□□□ 0.04
PHRF1-202ENST00000413872 ATG2BQ96BY7 2078 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 GPANK1O95872 356 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 ADIRFQ15847 76 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 STUMQ69YW2 141 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 CDH26Q8IXH8 852 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 APH1BQ8WW43 257 aa15.31■□□□□ 0.04
PHRF1-202ENST00000413872 TMEM272A0A1B0GTI8 110 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 CDC14BO60729 498 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 BGLAPP02818 100 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 FUCA1P04066 466 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 IAPPP10997 89 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 FBXW9Q5XUX1 488 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 SLC23A3Q6PIS1 610 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 SLC25A45Q8N413 288 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 TMED3Q9Y3Q3 217 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 TDRD15B5MCY1 1934 aaKnown RBP15.3■□□□□ 0.04
PHRF1-202ENST00000413872 C20orf202A1L168 122 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 TAGLN2P37802 199 aaKnown RBP15.3■□□□□ 0.04
PHRF1-202ENST00000413872 FAM181AQ8N9Y4 354 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 ADTRPQ96IZ2 230 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 AKR1E2Q96JD6 320 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 WDFY2Q96P53 400 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 C16orf97H3BN30 126 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 CRYZL1O95825 349 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 ACSM4P0C7M7 580 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 PGA3P0DJD8 388 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 F2RP25116 425 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 RPL35P42766 123 aaKnown RBP15.3■□□□□ 0.04
PHRF1-202ENST00000413872 CRYBB2P43320 205 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 FAM122BQ7Z309 247 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 PIK3IP1Q96FE7 263 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 MED30Q96HR3 178 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 WDR90Q96KV7 1748 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 WNT1P04628 370 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 ZNF816Q0VGE8 651 aaPredicted RBP15.3■□□□□ 0.04
PHRF1-202ENST00000413872 C1QL3Q5VWW1 255 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 OR8B12Q8NGG6 310 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 LHX4Q969G2 390 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 FKBP11Q9NYL4 201 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 MTFP1Q9UDX5 166 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 CABIN1Q9Y6J0 2220 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 CEACAM6P40199 344 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 DMRTC1Q5HYR2 192 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 TGIF2Q9GZN2 237 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 FZR1Q9UM11 496 aa15.3■□□□□ 0.04
PHRF1-202ENST00000413872 SMLR1H3BR10 107 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 METTL15P1P0C7V9 234 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 SELENOPP49908 381 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 SLC25A30Q5SVS4 291 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 OR5H6Q8NGV6 325 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 PRR7Q8TB68 274 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 TTTY12Q9BZ98 90 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 NMES1Q9C002 83 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 MRM2Q9UI43 246 aaKnown RBP15.29■□□□□ 0.04
PHRF1-202ENST00000413872 COL11A1P12107 1806 aaPredicted RBP15.29■□□□□ 0.04
PHRF1-202ENST00000413872 ZNF724A8MTY0 619 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 H3BMH7 237 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 ADAM20O43506 726 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 TMPRSS3P57727 454 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 CADM3Q8N126 398 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 NEIL1Q96FI4 390 aaPredicted RBP15.29■□□□□ 0.04
PHRF1-202ENST00000413872 BSCL2Q96G97 398 aaPredicted RBP15.29■□□□□ 0.04
PHRF1-202ENST00000413872 COL19A1Q14993 1142 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 LYG1Q8N1E2 194 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 CA10Q9NS85 328 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 FLVCR2Q9UPI3 526 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 NCBP2LA6PVI3 153 aaKnown RBP15.29■□□□□ 0.04
PHRF1-202ENST00000413872 PATE4P0C8F1 98 aa15.29■□□□□ 0.04
PHRF1-202ENST00000413872 HGDQ93099 445 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms