RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 UBXN6Q9BZV1 441 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 METTL9Q9H1A3 318 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 OR51B6Q9H340 312 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 RBFOX1Q9NWB1 397 aaKnown RBP3.31□□□□□ -1.88
BRCA1-204ENST00000412061 FAM206AQ9NX38 181 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 PCYOX1Q9UHG3 505 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 TP53TG5Q9Y2B4 290 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 SAMHD1Q9Y3Z3 626 aaKnown RBP3.31□□□□□ -1.88
BRCA1-204ENST00000412061 NEUROG3Q9Y4Z2 214 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 C9orf84Q5VXU9 1444 aa3.31□□□□□ -1.88
BRCA1-204ENST00000412061 ZCCHC6Q5VYS8 1495 aaKnown RBP3.3□□□□□ -1.88
BRCA1-204ENST00000412061 ABCC11Q96J66 1382 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 IGHV1-69DA0A0B4J2H0 117 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 RBFOX3A6NFN3 312 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 CEACAM18A8MTB9 384 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 F5H5K5 113 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 AZIN1O14977 448 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 ENTPD6O75354 484 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 SLC22A5O76082 557 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 HLA-DRAP01903 254 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 BGLAPP02818 100 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 TCRBP04435 133 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 ISG15P05161 165 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 TDGF1P13385 188 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 ZNF30P17039 623 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 TCN2P20062 427 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 CXCR1P25024 350 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 PSMB9P28065 219 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 IFNGR2P38484 337 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 GCLMP48507 274 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 SERPINB9P50453 376 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 TDGF1P3P51864 188 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 BAXQ07812 192 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 TMED2Q15363 201 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 TMEM236Q5W0B7 351 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 KDM4DQ6B0I6 523 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 ARL9Q6T311 187 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 UGT2A3Q6UWM9 527 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 LRRN1Q6UXK5 716 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 GPD1LQ8N335 351 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 POM121L12Q8N7R1 296 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 OR1S1Q8NH92 325 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 C22orf15Q8WYQ4 148 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 NTAN1Q96AB6 310 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 RILPQ96NA2 401 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 PITX2Q99697 317 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 SPNS1Q9H2V7 528 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 RBM22Q9NW64 420 aaKnown RBP eCLIP3.3□□□□□ -1.88
BRCA1-204ENST00000412061 PSG8Q9UQ74 426 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 SIGLEC7Q9Y286 467 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 TP53TG1Q9Y2A0 90 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 POGZQ7Z3K3 1410 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 EVC2Q86UK5 1308 aa3.3□□□□□ -1.88
BRCA1-204ENST00000412061 IGKV1-8A0A0C4DH67 115 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 KRTAP4-16G5E9R7 235 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-204ENST00000412061 ACOX3O15254 700 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 NDUFS5O43920 106 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 TRBV12-3P01733 135 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 THY1P04216 161 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 CTSLP07711 333 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 RPSAP08865 295 aaKnown RBP3.29□□□□□ -1.88
BRCA1-204ENST00000412061 CAPN2P17655 700 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 PSMB1P20618 241 aaKnown RBP3.29□□□□□ -1.88
BRCA1-204ENST00000412061 TALDO1P37837 337 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 CCL7P80098 99 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 LAMTOR4Q0VGL1 99 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 RBMY1FQ15415 496 aaKnown RBP3.29□□□□□ -1.88
BRCA1-204ENST00000412061 SYPL2Q5VXT5 272 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 CST9Q5W186 159 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 RNF165Q6ZSG1 346 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 FAM183BPQ6ZVS7 135 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 FAM19A5Q7Z5A7 132 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-204ENST00000412061 GTSCR1Q86UQ5 136 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 CPNE9Q8IYJ1 553 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 ZCCHC24Q8N2G6 241 aaKnown RBP3.29□□□□□ -1.88
BRCA1-204ENST00000412061 CCNYL1Q8N7R7 359 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 OR5B17Q8NGF7 314 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 STOML3Q8TAV4 291 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 ACTRT1Q8TDG2 376 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 DCUN1D4Q92564 292 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 RAB8BQ92930 207 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 MAGEB18Q96M61 343 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 DHRS9Q9BPW9 319 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 NRIP2Q9BQI9 281 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 FAAP24Q9BTP7 215 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 HEBP1Q9NRV9 189 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 ZNF226Q9NYT6 803 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 HES2Q9Y543 173 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 SNX10Q9Y5X0 201 aa3.29□□□□□ -1.88
BRCA1-204ENST00000412061 PALLDQ8WX93 1383 aa3.28□□□□□ -1.88
BRCA1-204ENST00000412061 PHYHO14832 338 aa3.28□□□□□ -1.88
BRCA1-204ENST00000412061 DHRS3O75911 302 aa3.28□□□□□ -1.88
BRCA1-204ENST00000412061 SOX14O95416 240 aa3.28□□□□□ -1.88
BRCA1-204ENST00000412061 MOSP00540 346 aa3.28□□□□□ -1.88
BRCA1-204ENST00000412061 PRPS1L1P21108 318 aa3.28□□□□□ -1.88
BRCA1-204ENST00000412061 G0S2P27469 103 aa3.28□□□□□ -1.88
BRCA1-204ENST00000412061 PSMB2P49721 201 aa3.28□□□□□ -1.88
BRCA1-204ENST00000412061 GNG10P50151 68 aa3.28□□□□□ -1.88
BRCA1-204ENST00000412061 HERVK_113P61574 105 aa3.28□□□□□ -1.88
BRCA1-204ENST00000412061 ARF6P62330 175 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms