RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 PIPP12273 146 aaPredicted RBP13.56□□□□□ -0.24
NOD1-202ENST00000411552 ZNF20P17024 532 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 AMY2BP19961 511 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 GLRA1P23415 457 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 MPZP25189 248 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 PAX8Q06710 450 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 XAF1Q6GPH4 301 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 TMPRSS11AQ6ZMR5 421 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 ANGPTL5Q86XS5 388 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 CALHM1Q8IU99 346 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 TEX29Q8N6K0 151 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 FAM216BQ8N7L0 139 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 POC1AQ8NBT0 407 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 OR5AK2Q8NH90 309 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 HAVCR2Q8TDQ0 301 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 ZNF488Q96MN9 340 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 PLCXD1Q9NUJ7 323 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 CNOT2Q9NZN8 540 aaKnown RBP13.56□□□□□ -0.24
NOD1-202ENST00000411552 NLKQ9UBE8 527 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 PSORS1C1Q9UIG5 152 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 AUP1Q9Y679 476 aa13.56□□□□□ -0.24
NOD1-202ENST00000411552 IGKV1-27A0A075B6S5 117 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 IGKV1-9A0A0C4DH69 117 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 TRBV2A0A0J9YWF9 115 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 OR2AT4A6NND4 320 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 DVL1O14640 695 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 PGA5P0DJD9 388 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 FUT6P51993 359 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 ATPAF1Q5TC12 328 aaPredicted RBP13.55□□□□□ -0.24
NOD1-202ENST00000411552 BTNL3Q6UXE8 466 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 AHSA2Q719I0 299 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 UTS2BQ765I0 119 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 SLC36A1Q7Z2H8 476 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 FGFRL1Q8N441 504 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 BPIFB6Q8NFQ5 453 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 ANGPTL6Q8NI99 470 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 TMIGD2Q96BF3 282 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 NUDT16L1Q9BRJ7 211 aaKnown RBP13.55□□□□□ -0.24
NOD1-202ENST00000411552 MRI1Q9BV20 369 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 COMMD4Q9H0A8 199 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 VCX3BQ9H321 246 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 POLDIP2Q9Y2S7 368 aa13.55□□□□□ -0.24
NOD1-202ENST00000411552 IGKV1D-17A0A075B6S4 117 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 KIR2DS1A0A191URI9 304 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 NKX6-3A6NJ46 265 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 ENSAO43768 121 aaKnown RBP13.54□□□□□ -0.24
NOD1-202ENST00000411552 NOS1APO75052 506 aaPredicted RBP13.54□□□□□ -0.24
NOD1-202ENST00000411552 FSHBP01225 129 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 SELLP14151 372 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 ATF1P18846 271 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 MED21Q13503 144 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 RIPK1Q13546 671 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 CDK5R1Q15078 307 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 CNN3Q15417 329 aaKnown RBP13.54□□□□□ -0.24
NOD1-202ENST00000411552 CCDC58Q4VC31 144 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 CD276Q5ZPR3 534 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 RPL22L1Q6P5R6 122 aaKnown RBP13.54□□□□□ -0.24
NOD1-202ENST00000411552 ACP7Q6ZNF0 438 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 ZNF788Q6ZQV5 615 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 ZNF485Q8NCK3 441 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 OR52N1Q8NH53 320 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 NANPQ8TBE9 248 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 GATAD2BQ8WXI9 593 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 ST8SIA4Q92187 359 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 RGP1Q92546 391 aaPredicted RBP13.54□□□□□ -0.24
NOD1-202ENST00000411552 GAFA1Q96PS6 74 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 NRIP2Q9BQI9 281 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 PKIBQ9C010 78 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 DNTTIP1Q9H147 329 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 FKBP14Q9NWM8 211 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 CHCHD3Q9NX63 227 aaKnown RBP13.54□□□□□ -0.24
NOD1-202ENST00000411552 BABAM2Q9NXR7 383 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 RASL12Q9NYN1 266 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 METRNQ9UJH8 293 aa13.54□□□□□ -0.24
NOD1-202ENST00000411552 SIRT4Q9Y6E7 314 aaPredicted RBP13.54□□□□□ -0.24
NOD1-202ENST00000411552 COL6A5A8TX70 2615 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 NXPH2O95156 264 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 ATP6V1G2O95670 118 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 LALBAP00709 142 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 RPSAP08865 295 aaKnown RBP13.53□□□□□ -0.24
NOD1-202ENST00000411552 ACAA1P09110 424 aaPredicted RBP13.53□□□□□ -0.24
NOD1-202ENST00000411552 PSG2P11465 335 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 C21orf33P30042 268 aaPredicted RBP13.53□□□□□ -0.24
NOD1-202ENST00000411552 IL24Q13007 206 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 IKZF1Q13422 519 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 SMIM21Q3B7S5 101 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 C6orf141Q5SZD1 244 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 IZUMO2Q6UXV1 221 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 BTN2A1Q7KYR7 527 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 BATF2Q8N1L9 274 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 STX19Q8N4C7 294 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 DNAAF1Q8NEP3 725 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 RPS4Y2Q8TD47 263 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 TSEN15Q8WW01 171 aaKnown RBP13.53□□□□□ -0.24
NOD1-202ENST00000411552 BORCS8Q96FH0 119 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 ZNF222Q9UK12 451 aa13.53□□□□□ -0.24
NOD1-202ENST00000411552 OGG1O15527 345 aa13.52□□□□□ -0.25
NOD1-202ENST00000411552 NDUFB3O43676 98 aa13.52□□□□□ -0.25
NOD1-202ENST00000411552 PLATP00750 562 aa13.52□□□□□ -0.25
NOD1-202ENST00000411552 EPHA1P21709 976 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms