RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 SPATA4Q8NEY3 305 aa-0.28□□□□□ -2.45
RNU2-55P-201ENST00000411146 SFXN5Q8TD22 340 aa-0.28□□□□□ -2.45
RNU2-55P-201ENST00000411146 MAL2Q969L2 176 aa-0.28□□□□□ -2.45
RNU2-55P-201ENST00000411146 C16orf45Q96MC5 204 aaPredicted RBP-0.28□□□□□ -2.45
RNU2-55P-201ENST00000411146 NAPGQ99747 312 aaPredicted RBP-0.28□□□□□ -2.45
RNU2-55P-201ENST00000411146 SMR3AQ99954 134 aa-0.28□□□□□ -2.45
RNU2-55P-201ENST00000411146 TSSK6Q9BXA6 273 aa-0.28□□□□□ -2.45
RNU2-55P-201ENST00000411146 FANCEQ9HB96 536 aa-0.28□□□□□ -2.45
RNU2-55P-201ENST00000411146 PSMC3IPQ9P2W1 217 aaPredicted RBP-0.28□□□□□ -2.45
RNU2-55P-201ENST00000411146 MRPS7Q9Y2R9 242 aaKnown RBP-0.28□□□□□ -2.45
RNU2-55P-201ENST00000411146 ZNF706Q9Y5V0 76 aaPredicted RBP-0.28□□□□□ -2.45
RNU2-55P-201ENST00000411146 ENPP4Q9Y6X5 453 aa-0.28□□□□□ -2.45
RNU2-55P-201ENST00000411146 RTEL1-TNFRSF6BF6WH68 1400 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 MROH7Q68CQ1 1323 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 UBN2Q6ZU65 1347 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 MROH5Q6ZUA9 1318 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 A0A0J9YX75 114 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 PCP4L1A6NKN8 68 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 F5H5P2 479 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 LINC01619G3V211 115 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 K7ERS5 55 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 CDK1P06493 297 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 MX1P20591 662 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 PRSS3P35030 304 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 SSR1P43307 286 aaKnown RBP-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 CEBPDP49716 269 aaPredicted RBP-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 IRF8Q02556 426 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 MAPRE2Q15555 327 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 BCL2A1Q16548 175 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 TMEM241Q24JQ0 296 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 ACSBG2Q5FVE4 666 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 NIPAL1Q6NVV3 410 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 RNASEKQ6P5S7 137 aaKnown RBP-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 COA5Q86WW8 74 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 TICAM2Q86XR7 235 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 RAB43Q86YS6 212 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 BHLHE23Q8NDY6 225 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR52M1Q8NGK5 317 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 APH1AQ96BI3 265 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 ZNF514Q96K75 400 aaPredicted RBP-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 TEAD3Q99594 435 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 TAS2R9Q9NYW1 312 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 NDRG2Q9UN36 371 aaKnown RBP-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 KLF13Q9Y2Y9 288 aaPredicted RBP-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 FADS3Q9Y5Q0 445 aa-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.29□□□□□ -2.46
RNU2-55P-201ENST00000411146 SCN9AQ15858 1988 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 IGKV1-9A0A0C4DH69 117 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 A0A1B0GTI1 187 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 A0A1B0GVG6 124 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 A8MUN3 132 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 KLRC4-KLRK1H3BQV0 150 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 K7EPK0 472 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 AP3B1O00203 1094 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 TP53I11O14683 189 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 LECT2O14960 151 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 ZBTB5O15062 677 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 B3GALNT1O75752 331 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR2J3O76001 311 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 ZNF24P17028 368 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 ZNF7P17097 686 aaPredicted RBP-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 PAX6P26367 422 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 NBL1P41271 181 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 UBE2MP61081 183 aaKnown RBP-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 RPS15P62841 145 aaKnown RBP-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 TNXAQ16473 311 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 ATAD3BQ5T9A4 648 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 C22orf42Q6IC83 251 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR2T5Q6IEZ7 315 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 LYZL2Q7Z4W2 148 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 SLC22A9Q8IVM8 553 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR9K2Q8NGE7 335 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR2T29Q8NH02 315 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 ORAOV1Q8WV07 137 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 GPR22Q99680 433 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 ACTR3CQ9C0K3 210 aaPredicted RBP-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 ANKRA2Q9H9E1 313 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 PXMP2Q9NR77 195 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 NAGKQ9UJ70 344 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 RCL1Q9Y2P8 373 aaKnown RBP-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 MRPS16Q9Y3D3 137 aaKnown RBP-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 MINOS1-NBL1R4GNA1 71 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 PTPRBP23467 1997 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 EML5Q05BV3 1969 aa-0.3□□□□□ -2.46
RNU2-55P-201ENST00000411146 IGLV3-9A0A075B6K5 115 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 A0A0J9YYE9 177 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 VPS37CA5D8V6 355 aaPredicted RBP-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 SIRPB1O00241 398 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 ERI3O43414 337 aaKnown RBP-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 SPAG6O75602 509 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 TRBC1P01850 177 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 HBE1P02100 147 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 CLTAP09496 248 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 ZNF705DP0CH99 300 aaPredicted RBP-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 ZNF705BP0CI00 300 aaPredicted RBP-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 GLRA2P23416 452 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 PEBP1P30086 187 aaKnown RBP-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 RFC3P40938 356 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 MAGEA1P43355 309 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 PLCXD2Q0VAA5 305 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms