RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 TMEM106BQ9NUM4 274 aa12.82□□□□□ -0.36
LSM5-207ENST00000410044 POLDIP2Q9Y2S7 368 aa12.82□□□□□ -0.36
LSM5-207ENST00000410044 AK6Q9Y3D8 172 aaKnown RBP12.82□□□□□ -0.36
LSM5-207ENST00000410044 CACNG2Q9Y698 323 aa12.82□□□□□ -0.36
LSM5-207ENST00000410044 IGHV3-64DA0A0J9YX35 117 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 A6NLC8 198 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 LRRC30A6NM36 301 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 SRRM5B3KS81 715 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 SYNGR1O43759 233 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 CDC14BO60729 498 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 TMEM127O75204 238 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 RHBDL1O75783 438 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 LY6HO94772 140 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 IL1AP01583 271 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 CSF3P09919 207 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 PGA5P0DJD9 388 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 SDC2P34741 201 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 RANBP1P43487 201 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 DSCR9P59020 149 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 C1orf87Q8N0U7 546 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 GCSAMQ8N6F7 178 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 PNLDC1Q8NA58 520 aaKnown RBP12.81□□□□□ -0.36
LSM5-207ENST00000410044 POC1AQ8NBT0 407 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 CCL17Q92583 94 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 PERPQ96FX8 193 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 GPER1Q99527 375 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 CNTD2Q9H8S5 307 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 MTCH1Q9NZJ7 389 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 NDUFA13Q9P0J0 144 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 TACC2O95359 2948 aa12.81□□□□□ -0.36
LSM5-207ENST00000410044 IGKV1-12A0A0C4DH73 117 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 A0A0G2JK05 382 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 LYNX1G3V0Z9 82 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 ZNF701M0R085 212 aaPredicted RBP12.8□□□□□ -0.36
LSM5-207ENST00000410044 NDUFS8O00217 210 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 SLC17A2O00624 439 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 SLC22A1O15245 554 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 SSX4O60224 188 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 KDM4BO94953 1096 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 CDRT1O95170 752 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 IGKV1D-12P01611 117 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 LYNX1P0DP58 116 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 VBP1P61758 197 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 NCS1P62166 190 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 LSM3P62310 102 aaKnown RBP12.8□□□□□ -0.36
LSM5-207ENST00000410044 SLC25A26Q70HW3 274 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 C1QL2Q7Z5L3 287 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 NR2C2APQ86WQ0 139 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 OR51F2Q8NH61 342 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 SLC25A28Q96A46 364 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 RFT1Q96AA3 541 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 FOXC2Q99958 501 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 NRIP2Q9BQI9 281 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 HES4Q9HCC6 221 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 RASL12Q9NYN1 266 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 IL36GQ9NZH8 169 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 GHRLQ9UBU3 117 aa12.8□□□□□ -0.36
LSM5-207ENST00000410044 ABCA12Q86UK0 2595 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 PDZD2O15018 2839 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 SMIM31A0A1B0GVY4 71 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 NOTOA8MTQ0 251 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 SPRY1O43609 319 aaPredicted RBP12.79□□□□□ -0.36
LSM5-207ENST00000410044 CYB5AP00167 134 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 TMEM225BP0DP42 221 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 IRF2P14316 349 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 TGFBR1P36897 503 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 RPS19P39019 145 aaKnown RBP12.79□□□□□ -0.36
LSM5-207ENST00000410044 PDLIM4P50479 330 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 TEX36Q5VZQ5 186 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 ELP2Q6IA86 826 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 CROCCP3Q8IVE0 287 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 Q8IYB0 196 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 JAGN1Q8N5M9 183 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 OR4D6Q8NGJ1 314 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 OR6M1Q8NGM8 313 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 LRRC29Q8WV35 223 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 TNFAIP8L1Q8WVP5 186 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 C1orf147Q96MC9 270 aaPredicted RBP12.79□□□□□ -0.36
LSM5-207ENST00000410044 SEBOXQ9HB31 216 aaPredicted RBP12.79□□□□□ -0.36
LSM5-207ENST00000410044 DCAF16Q9NXF7 216 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 TREM2Q9NZC2 230 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 NPTNQ9Y639 398 aa12.79□□□□□ -0.36
LSM5-207ENST00000410044 hCG_1807616A0A1W2PRN6 198 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 DPPA5A6NC42 116 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 IFITM5A6NNB3 132 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 VWC2LB2RUY7 222 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 CLDN25C9JDP6 229 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.78□□□□□ -0.36
LSM5-207ENST00000410044 ZNF780AO75290 641 aaPredicted RBP12.78□□□□□ -0.36
LSM5-207ENST00000410044 CYB5R3P00387 301 aaPredicted RBP12.78□□□□□ -0.36
LSM5-207ENST00000410044 CLEC2LP0C7M8 214 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 HTR2CP28335 458 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 OR3A4PP47883 348 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 POU3F4P49335 361 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 OR10A3P58181 314 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 SHEQ5VZ18 495 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 USP43Q70EL4 1123 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 FAM90A1Q86YD7 464 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 ZNF525Q8N782 197 aa12.78□□□□□ -0.36
LSM5-207ENST00000410044 OR5D18Q8NGL1 313 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms