RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 DHDHQ9UQ10 334 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 LRCH1Q9Y2L9 728 aa18.65■□□□□ 0.58
PTCD3-203ENST00000409783 TRAV20A0A0B4J274 112 aa18.64■□□□□ 0.57
PTCD3-203ENST00000409783 TRBV5-5A0A0J9YX44 114 aa18.64■□□□□ 0.57
PTCD3-203ENST00000409783 RGS10O43665 173 aa18.64■□□□□ 0.57
PTCD3-203ENST00000409783 NOS1APO75052 506 aaPredicted RBP18.64■□□□□ 0.57
PTCD3-203ENST00000409783 GYPAP02724 150 aa18.64■□□□□ 0.57
PTCD3-203ENST00000409783 CD1AP06126 327 aa18.64■□□□□ 0.57
PTCD3-203ENST00000409783 AZGP1P25311 298 aaKnown RBP18.64■□□□□ 0.57
PTCD3-203ENST00000409783 LCN2P80188 198 aa18.64■□□□□ 0.57
PTCD3-203ENST00000409783 BDH1Q02338 343 aa18.64■□□□□ 0.57
PTCD3-203ENST00000409783 KCNJ8Q15842 424 aa18.64■□□□□ 0.57
PTCD3-203ENST00000409783 RNF144BQ7Z419 303 aa18.64■□□□□ 0.57
PTCD3-203ENST00000409783 POC1AQ8NBT0 407 aa18.64■□□□□ 0.57
PTCD3-203ENST00000409783 OR13C9Q8NGT0 318 aa18.64■□□□□ 0.57
PTCD3-203ENST00000409783 ZNF671Q8TAW3 534 aa18.64■□□□□ 0.57
PTCD3-203ENST00000409783 TSEN15Q8WW01 171 aaKnown RBP18.64■□□□□ 0.57
PTCD3-203ENST00000409783 C12orf43Q96C57 262 aaKnown RBP18.64■□□□□ 0.57
PTCD3-203ENST00000409783 ZCCHC4Q9H5U6 513 aa18.64■□□□□ 0.57
PTCD3-203ENST00000409783 KAAG1Q9UBP8 84 aa18.64■□□□□ 0.57
PTCD3-203ENST00000409783 PHF1O43189 567 aaPredicted RBP18.63■□□□□ 0.57
PTCD3-203ENST00000409783 NDUFA2O43678 99 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 FOXH1O75593 365 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 ALX3O95076 343 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 ACAA1P09110 424 aaPredicted RBP18.63■□□□□ 0.57
PTCD3-203ENST00000409783 PGA5P0DJD9 388 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 SOX2P48431 317 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 GMFBP60983 142 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 IL24Q13007 206 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 MICBQ29980 383 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 STUMQ69YW2 141 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 ZNF529Q6P280 563 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 PRSS48Q7RTY5 328 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 SERPINA12Q8IW75 414 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 SPSB1Q96BD6 273 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 BORCS8Q96FH0 119 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 ZNF488Q96MN9 340 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 Q9H521 79 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 SVEP1Q4LDE5 3571 aa18.63■□□□□ 0.57
PTCD3-203ENST00000409783 PPIAL4CA0A0B4J2A2 164 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 TRAPPC2LH3BP13 241 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 ADAM20O43506 726 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 CRLF1O75462 422 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 HOXB4P17483 251 aaPredicted RBP18.62■□□□□ 0.57
PTCD3-203ENST00000409783 CELP19835 753 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 PRKACBP22694 351 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 GLRA1P23415 457 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 PITPNBP48739 271 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 ERVK11-1P61568 191 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 PAX2Q02962 417 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 SPHARQ15513 63 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 CR1LQ2VPA4 569 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 ESCO2Q56NI9 601 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 ATPAF1Q5TC12 328 aaPredicted RBP18.62■□□□□ 0.57
PTCD3-203ENST00000409783 OR5T2Q8NGG2 359 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 OR8B3Q8NGG8 313 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 DACT3Q96B18 629 aaPredicted RBP18.62■□□□□ 0.57
PTCD3-203ENST00000409783 OPALINQ96PE5 141 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 OR8B2Q96RD0 313 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 NRIP2Q9BQI9 281 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 SSBP3Q9BWW4 388 aaPredicted RBP18.62■□□□□ 0.57
PTCD3-203ENST00000409783 RASSF4Q9H2L5 321 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 SNTG1Q9NSN8 517 aa18.62■□□□□ 0.57
PTCD3-203ENST00000409783 PNMA8CA0A1B0GUJ8 204 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 A0A1B0GW55 424 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 DUX4L2P0CJ85 424 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 DUX4L3P0CJ86 424 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 DUX4L4P0CJ87 422 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 DUX4L5P0CJ88 424 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 DUX4L6P0CJ89 424 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 DUX4L7P0CJ90 424 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 RBP2P50120 134 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 ATP1B3P54709 279 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 YIF1BQ5BJH7 314 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 WDR25Q64LD2 544 aaPredicted RBP18.61■□□□□ 0.57
PTCD3-203ENST00000409783 DUX4L9Q6RFH8 374 aaPredicted RBP18.61■□□□□ 0.57
PTCD3-203ENST00000409783 NLRC3Q7RTR2 1065 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 OR5D14Q8NGL3 314 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 ANGPTL6Q8NI99 470 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 TMEM106AQ96A25 262 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 CCL13Q99616 98 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 HES4Q9HCC6 221 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 SMURF1Q9HCE7 757 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 MMP26Q9NRE1 261 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 MTCH1Q9NZJ7 389 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 NLKQ9UBE8 527 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 DUX4Q9UBX2 424 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 POLDIP2Q9Y2S7 368 aa18.61■□□□□ 0.57
PTCD3-203ENST00000409783 SULT1B1O43704 296 aa18.6■□□□□ 0.57
PTCD3-203ENST00000409783 TFF1P04155 84 aa18.6■□□□□ 0.57
PTCD3-203ENST00000409783 OCM2P0CE71 109 aa18.6■□□□□ 0.57
PTCD3-203ENST00000409783 GNB2P62879 340 aa18.6■□□□□ 0.57
PTCD3-203ENST00000409783 FAM120AOSQ5T036 256 aa18.6■□□□□ 0.57
PTCD3-203ENST00000409783 ACP7Q6ZNF0 438 aa18.6■□□□□ 0.57
PTCD3-203ENST00000409783 LHFPL2Q6ZUX7 228 aa18.6■□□□□ 0.57
PTCD3-203ENST00000409783 TMIGD2Q96BF3 282 aa18.6■□□□□ 0.57
PTCD3-203ENST00000409783 SPACA5Q96QH8 159 aa18.6■□□□□ 0.57
PTCD3-203ENST00000409783 RASL12Q9NYN1 266 aa18.6■□□□□ 0.57
PTCD3-203ENST00000409783 TAS2R4Q9NYW5 299 aa18.6■□□□□ 0.57
PTCD3-203ENST00000409783 DNAJB11Q9UBS4 358 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms