RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TMEM225BP0DP42 221 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 IGFBP4P22692 258 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 FCGR2CP31995 323 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 LPAR6P43657 344 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 MTCP1P56278 107 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 MRPS34P82930 218 aaKnown RBP9.38□□□□□ -0.91
CLIP4-204ENST00000404424 SPEM2Q0P670 501 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 CNN3Q15417 329 aaKnown RBP9.38□□□□□ -0.91
CLIP4-204ENST00000404424 GGNBP1Q5YKI7 109 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 DHRS11Q6UWP2 260 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 LYPD6BQ8NI32 183 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 SGK3Q96BR1 496 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 GALNT14Q96FL9 552 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 ULBP2Q9BZM5 246 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 NECAP2Q9NVZ3 263 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 CABIN1Q9Y6J0 2220 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 LY6G6EA0A0G2JKS1 128 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 FBXO24O75426 580 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 LIFP15018 202 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 DVL1P1P54792 670 aaPredicted RBP9.37□□□□□ -0.91
CLIP4-204ENST00000404424 EXT1Q16394 746 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 RAET1LQ5VY80 246 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 OR2A2Q6IF42 318 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 FOXRED2Q8IWF2 684 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 C20orf196Q8IYI0 205 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 UBAC2Q8NBM4 344 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 BIN3Q9NQY0 253 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 FBXL17Q9UF56 701 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 FAM96BQ9Y3D0 163 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 U3KQA8 63 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 CEP290O15078 2479 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 E5RGE8 158 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 DNPH1O43598 174 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 FARS2O95363 451 aaKnown RBP9.37□□□□□ -0.91
CLIP4-204ENST00000404424 SFTA3P0C7M3 94 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 FGF5P12034 268 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 RCC1P18754 421 aaPredicted RBP9.37□□□□□ -0.91
CLIP4-204ENST00000404424 NME2P22392 152 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 CRYGSP22914 178 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 TMEM33P57088 247 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 RAC1P63000 192 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 PDZK1IP1Q13113 114 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 RAB35Q15286 201 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 RSU1Q15404 277 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 HMGN3Q15651 99 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 SWI5Q1ZZU3 235 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 ZNF528Q3MIS6 628 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 FAM76BQ5HYJ3 339 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 DTX1Q86Y01 620 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 COMMD1Q8N668 190 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 NTNG2Q96CW9 530 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 CMSS1Q9BQ75 279 aaKnown RBP9.37□□□□□ -0.91
CLIP4-204ENST00000404424 SF3B5Q9BWJ5 86 aaKnown RBP9.37□□□□□ -0.91
CLIP4-204ENST00000404424 GPR173Q9NS66 373 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 NSG2Q9Y328 171 aa9.37□□□□□ -0.91
CLIP4-204ENST00000404424 ASCC3Q8N3C0 2202 aaKnown RBP9.36□□□□□ -0.91
CLIP4-204ENST00000404424 IGHV1-45A0A0A0MS14 117 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 IGHV3-15A0A0B4J1V0 119 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 GJE1A6NN92 205 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 ZIC3O60481 467 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 F12P00748 615 aaPredicted RBP9.36□□□□□ -0.91
CLIP4-204ENST00000404424 DBHP09172 617 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 PAX6P26367 422 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 PIGPP57054 158 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 SNAI3Q3KNW1 292 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 AVPI1Q5T686 147 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 ASCL4Q6XD76 172 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 LHFPL2Q6ZUX7 228 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 LRTM2Q8N967 370 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 M1APQ8TC57 530 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 GLYATL2Q8WU03 294 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 MRPL24Q96A35 216 aaKnown RBP9.36□□□□□ -0.91
CLIP4-204ENST00000404424 FBXO17Q96EF6 278 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 UCN2Q96RP3 112 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 SULT4A1Q9BR01 284 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 SUCNR1Q9BXA5 334 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 NAA60Q9H7X0 242 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 FAM212BQ9NTI7 297 aaPredicted RBP9.36□□□□□ -0.91
CLIP4-204ENST00000404424 WNT16Q9UBV4 365 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 ZNF391Q9UJN7 358 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 DKKL1Q9UK85 242 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 AMDHD2Q9Y303 409 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 PQLC2LA1A4F0 135 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 SGCEO43556 437 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 ZNF728P0DKX0 622 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 RBP2P50120 134 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 IL11RAQ14626 422 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 SHEQ5VZ18 495 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 Q6ZRG5 221 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 GPR137CQ8N3F9 429 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 ZIC4Q8N9L1 334 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 DMBX1Q8NFW5 382 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 REEP6Q96HR9 211 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 IMMP1LQ96LU5 166 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 GNRHR2Q96P88 292 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 HDHD3Q9BSH5 251 aaPredicted RBP9.36□□□□□ -0.91
CLIP4-204ENST00000404424 FAAP24Q9BTP7 215 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 ZNF700Q9H0M5 742 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 ARV1Q9H2C2 271 aa9.36□□□□□ -0.91
CLIP4-204ENST00000404424 AKIRIN1Q9H9L7 192 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms