RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 FAM168AQ92567 244 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 GFI1Q99684 422 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 TCF7L1Q9HCS4 588 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 EXOSC4Q9NPD3 245 aaKnown RBP13.4□□□□□ -0.26
HMGA1-204ENST00000401473 SSR3Q9UNL2 185 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 YLPM1P49750 1951 aaKnown RBP13.4□□□□□ -0.26
HMGA1-204ENST00000401473 LOC100506127A0A0U1RQW1 187 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 hCG_1807616A0A1W2PRN6 198 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 F8VVB4 439 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 F8VWA3 439 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 WNT9BO14905 357 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 SPRY1O43609 319 aaPredicted RBP13.4□□□□□ -0.26
HMGA1-204ENST00000401473 ARL6IP5O75915 188 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 GIFP27352 417 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 TGFBR1P36897 503 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 ZP1P60852 638 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 PDZK1IP1Q13113 114 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 SLC25A26Q70HW3 274 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 ZNF488Q96MN9 340 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 BPESC1Q9GZL8 116 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 NAA50Q9GZZ1 169 aaKnown RBP13.4□□□□□ -0.26
HMGA1-204ENST00000401473 WDR13Q9H1Z4 485 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 MTCH1Q9NZJ7 389 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 RNF7Q9UBF6 113 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 SCOCQ9UIL1 159 aa13.4□□□□□ -0.26
HMGA1-204ENST00000401473 ARHGAP32A7KAX9 2087 aa13.39□□□□□ -0.27
HMGA1-204ENST00000401473 IGKV1-12A0A0C4DH73 117 aa13.39□□□□□ -0.27
HMGA1-204ENST00000401473 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.39□□□□□ -0.27
HMGA1-204ENST00000401473 MAGEB3O15480 346 aa13.39□□□□□ -0.27
HMGA1-204ENST00000401473 IGKV1D-12P01611 117 aa13.39□□□□□ -0.27
HMGA1-204ENST00000401473 EGR1P18146 543 aa13.39□□□□□ -0.27
HMGA1-204ENST00000401473 ZNF93P35789 620 aaPredicted RBP13.39□□□□□ -0.27
HMGA1-204ENST00000401473 RPL5P46777 297 aaKnown RBP13.39□□□□□ -0.27
HMGA1-204ENST00000401473 PDLIM4P50479 330 aa13.39□□□□□ -0.27
HMGA1-204ENST00000401473 DDI2Q5TDH0 399 aa13.39□□□□□ -0.27
HMGA1-204ENST00000401473 SFRP4Q6FHJ7 346 aaPredicted RBP13.39□□□□□ -0.27
HMGA1-204ENST00000401473 CLEC2AQ6UVW9 174 aa13.39□□□□□ -0.27
HMGA1-204ENST00000401473 BATF2Q8N1L9 274 aa13.39□□□□□ -0.27
HMGA1-204ENST00000401473 LRRC29Q8WV35 223 aa13.39□□□□□ -0.27
HMGA1-204ENST00000401473 MYOZ1Q9NP98 299 aaPredicted RBP13.39□□□□□ -0.27
HMGA1-204ENST00000401473 MALRD1Q5VYJ5 2156 aa13.39□□□□□ -0.27
HMGA1-204ENST00000401473 TRIM64BA6NI03 449 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 VWC2LB2RUY7 222 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 J3QT63 122 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 PPIHO43447 177 aaKnown RBP13.38□□□□□ -0.27
HMGA1-204ENST00000401473 ANGPTL7O43827 346 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 CD37P11049 281 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 POU3F4P49335 361 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 GMFBP60983 142 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 LSM3P62310 102 aaKnown RBP13.38□□□□□ -0.27
HMGA1-204ENST00000401473 IL24Q13007 206 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 AVPI1Q5T686 147 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 NR2C2APQ86WQ0 139 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 PKIBQ9C010 78 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 CNTD2Q9H8S5 307 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 SNTG1Q9NSN8 517 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 AK6Q9Y3D8 172 aaKnown RBP13.38□□□□□ -0.27
HMGA1-204ENST00000401473 WIPI2Q9Y4P8 454 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 ABCA1O95477 2261 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 WNK2Q9Y3S1 2297 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 TRAV1-2A0A0B4J238 106 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 LRRC30A6NM36 301 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 SRRM5B3KS81 715 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 AIREO43918 545 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 OR3A4PP47883 348 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 NPBWR2P48146 333 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 SHEQ5VZ18 495 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 SLC16A12Q6ZSM3 486 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 BOLLQ8N9W6 283 aaKnown RBP13.38□□□□□ -0.27
HMGA1-204ENST00000401473 OR11L1Q8NGX0 322 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 OR51F2Q8NH61 342 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 ZNF671Q8TAW3 534 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 Q96MF0 132 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 NPTNQ9Y639 398 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 F8P00451 2351 aa13.38□□□□□ -0.27
HMGA1-204ENST00000401473 MEGF11A6BM72 1044 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 CLDN25C9JDP6 229 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 IFNL4K9M1U5 179 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 NOS1APO75052 506 aaPredicted RBP13.37□□□□□ -0.27
HMGA1-204ENST00000401473 PGA5P0DJD9 388 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 IRF2P14316 349 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 PTGFRP43088 359 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 ERVK11-1P61568 191 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 ZMYND11Q15326 602 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 GPR107Q5VW38 600 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 GPR141Q7Z602 305 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 JAGN1Q8N5M9 183 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 OR4D6Q8NGJ1 314 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 HPS1Q92902 700 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 SLAMF9Q96A28 289 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 GPER1Q99527 375 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 TMEM165Q9HC07 324 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 GSTK1Q9Y2Q3 226 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 ABCA2Q9BZC7 2435 aa13.37□□□□□ -0.27
HMGA1-204ENST00000401473 NDUFS8O00217 210 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 CDRT1O95170 752 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 ACAA1P09110 424 aaPredicted RBP13.36□□□□□ -0.27
HMGA1-204ENST00000401473 TMEM225BP0DP42 221 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 NR4A2P43354 598 aa13.36□□□□□ -0.27
HMGA1-204ENST00000401473 GPR6P46095 362 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms