RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 IGHV3-20A0A0C4DH32 117 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 A0A1W2PP11 408 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 MARCH11A6NNE9 402 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 STMND1H3BQB6 276 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 DMRTC1Q5HYR2 192 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 DEGS2Q6QHC5 323 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 GLIPR1L1Q6UWM5 242 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 TSTD1Q8NFU3 115 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 OR5D14Q8NGL3 314 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 OR1N1Q8NGS0 311 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 OR13D1Q8NGV5 346 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 OR51F2Q8NH61 342 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 TMEM230Q96A57 120 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 PBDC1Q9BVG4 233 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 CNTNAP3Q9BZ76 1288 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 H3BML4 177 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 ZNF354AO60765 605 aaPredicted RBP14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 SNRPCP09234 159 aaKnown RBP14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 ZNF20P17024 532 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 IGFBP4P22692 258 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 IL2RGP31785 369 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 DEFB133Q30KQ1 61 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 PLAC9Q5JTB6 97 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 H1FNTQ75WM6 255 aaPredicted RBP14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 OR10S1Q8NGN2 331 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 TERB2Q8NHR7 220 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 C2orf50Q96LR7 162 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 LPAR5Q9H1C0 372 aa14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 PHF3Q92576 2039 aaKnown RBP14.07□□□□□ -0.16
CHMP1A-201ENST00000397901 TMEM14DPA8MWL7 114 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 NME2P1O60361 137 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 FGF7P21781 194 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 FBLP22087 321 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 OR3A4PP47883 348 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 BIDP55957 195 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 OPN5Q6U736 354 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 CLEC18BQ6UXF7 455 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 MVB12AQ96EY5 273 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 GNRHR2Q96P88 292 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 MRPS28Q9Y2Q9 187 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 SMCO3A2RU48 225 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 LILRA5A6NI73 299 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 NR2C1P13056 603 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 G0S2P27469 103 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 SMAD4Q13485 552 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 OR1L3Q8NH93 324 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 SLC25A43Q8WUT9 341 aaPredicted RBP14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 PACRGQ96M98 296 aaPredicted RBP14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 PHF7Q9BWX1 381 aaPredicted RBP14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 SLC26A1Q9H2B4 701 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 ASXL3Q9C0F0 2248 aa14.06□□□□□ -0.16
CHMP1A-201ENST00000397901 RAD51DO75771 328 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 SFT2D2O95562 160 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 OPN1LWP04000 364 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 TBPP20226 339 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 ANOS1P23352 680 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 THBS4P35443 961 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 ARL4DP49703 201 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 FBXW4P57775 412 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 FOXK1P85037 733 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 ZNF616Q08AN1 781 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 AKR1C8PQ5T2L2 129 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 POC1AQ8NBT0 407 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 TMEM234Q8WY98 164 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 POM121Q96HA1 1249 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 VN1R1Q9GZP7 353 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 PARP12Q9H0J9 701 aaKnown RBP14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 LUZP4Q9P127 313 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 SUSD2Q9UGT4 822 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 POLR1DQ9Y2S0 133 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 PUS1Q9Y606 427 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 A0A1W2PR77 199 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 H3BMH7 237 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 PHOX2AO14813 284 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 SCGNO76038 276 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 OR13C7P0DN81 318 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 S100A10P60903 97 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 HNF4GQ14541 408 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 ELOBQ15370 118 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 ANKRD55Q3KP44 614 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 ABHD12BQ7Z5M8 362 aaPredicted RBP14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 Q8WTZ3 238 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 METTL8Q9H825 291 aaKnown RBP14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 CHST11Q9NPF2 352 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 GPR132Q9UNW8 380 aa14.05□□□□□ -0.16
CHMP1A-201ENST00000397901 A0A087WWC5 75 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 CXCL1P09341 107 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 DANCRP0C864 163 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 HIST1H1DP16402 221 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 SOHLH1Q5JUK2 328 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 OR2T2Q6IF00 324 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 RPUSD3Q6P087 351 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 FOXRED2Q8IWF2 684 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 ZNF441Q8N8Z8 693 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 FAM71F1Q96KD3 344 aaPredicted RBP14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 OR10C1Q96KK4 312 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 UNKLQ9H9P5 680 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 CRLF2Q9HC73 371 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 GSKIPQ9P0R6 139 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 FBXL17Q9UF56 701 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms