RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 CALCRP30988 508 aa16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 IDH3GP51553 393 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 GLYATL3Q5SZD4 288 aa16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 DOK3Q7L591 496 aa16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 COMMD7Q86VX2 200 aa16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 SLC30A7Q8NEW0 376 aa16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 OR51S1Q8NGJ8 323 aa16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 SGK3Q96BR1 496 aa16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 S100PBPQ96BU1 408 aa16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 SEH1LQ96EE3 360 aa16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 DHRS9Q9BPW9 319 aa16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 C1QTNF6Q9BXI9 259 aa16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 ELOVL5Q9NYP7 299 aa16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 TAS2R4Q9NYW5 299 aa16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 AMDHD2Q9Y303 409 aa16.7■□□□□ 0.26
PDLIM2-204ENST00000397760 F5H5P2 479 aa16.69■□□□□ 0.26
PDLIM2-204ENST00000397760 H3BUI4 141 aa16.69■□□□□ 0.26
PDLIM2-204ENST00000397760 LMX1BO60663 402 aa16.69■□□□□ 0.26
PDLIM2-204ENST00000397760 CFDP00746 253 aaPredicted RBP16.69■□□□□ 0.26
PDLIM2-204ENST00000397760 CD74P04233 296 aa16.69■□□□□ 0.26
PDLIM2-204ENST00000397760 CD3DP04234 171 aa16.69■□□□□ 0.26
PDLIM2-204ENST00000397760 RLN1P04808 185 aa16.69■□□□□ 0.26
PDLIM2-204ENST00000397760 CELA3BP08861 270 aa16.69■□□□□ 0.26
PDLIM2-204ENST00000397760 S100A11P31949 105 aa16.69■□□□□ 0.26
PDLIM2-204ENST00000397760 TIMM23BQ5SRD1 257 aa16.69■□□□□ 0.26
PDLIM2-204ENST00000397760 COLCA1Q6ZS62 124 aa16.69■□□□□ 0.26
PDLIM2-204ENST00000397760 LYPD6Q86Y78 171 aa16.69■□□□□ 0.26
PDLIM2-204ENST00000397760 PLPP7Q8NBV4 271 aa16.69■□□□□ 0.26
PDLIM2-204ENST00000397760 B3GALNT1O75752 331 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 SCGNO76038 276 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 GUCA2AQ02747 115 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 ZMYND11Q15326 602 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 TBC1D28Q2M2D7 210 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 FAM209AQ5JX71 171 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 MYPOPQ86VE0 399 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 FJX1Q86VR8 437 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 STEAP2Q8NFT2 490 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 OR4D10Q8NGI6 311 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 OR2AE1Q8NHA4 323 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 FGGYQ96C11 551 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 SLC25A15Q9Y619 301 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 RAB3DO95716 219 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 IGKV3-15P01624 115 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 MPZP25189 248 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 CLVS2Q5SYC1 327 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 MUC20Q8N307 709 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 REEP6Q96HR9 211 aa16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 NUDT16L1Q9BRJ7 211 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-204ENST00000397760 POLEQ07864 2286 aa16.67■□□□□ 0.26
PDLIM2-204ENST00000397760 USP24Q9UPU5 2620 aa16.67■□□□□ 0.26
PDLIM2-204ENST00000397760 B8ZZF3 427 aa16.67■□□□□ 0.26
PDLIM2-204ENST00000397760 PPP3CBP16298 524 aa16.67■□□□□ 0.26
PDLIM2-204ENST00000397760 BAMBIQ13145 260 aa16.67■□□□□ 0.26
PDLIM2-204ENST00000397760 AANATQ16613 207 aa16.67■□□□□ 0.26
PDLIM2-204ENST00000397760 PAQR4Q8N4S7 273 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-204ENST00000397760 OR52B4Q8NGK2 314 aa16.67■□□□□ 0.26
PDLIM2-204ENST00000397760 OR1J2Q8NGS2 313 aa16.67■□□□□ 0.26
PDLIM2-204ENST00000397760 OR14K1Q8NGZ2 314 aa16.67■□□□□ 0.26
PDLIM2-204ENST00000397760 TNFAIP8L1Q8WVP5 186 aa16.67■□□□□ 0.26
PDLIM2-204ENST00000397760 RAB22AQ9UL26 194 aa16.67■□□□□ 0.26
PDLIM2-204ENST00000397760 CACNA1BQ00975 2339 aa16.67■□□□□ 0.26
PDLIM2-204ENST00000397760 METTL21EPA6NDL7 271 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 XRCC2O43543 280 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 MTRF1O75570 445 aaKnown RBP16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 RP2O75695 350 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 CYB5AP00167 134 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 GSK3AP49840 483 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 H2BFSP57053 126 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 MEF2DQ14814 521 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 LPCAT3Q6P1A2 487 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 CCDC54Q8NEL0 328 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 APOBEC3DQ96AK3 386 aaPredicted RBP16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 MUCL1Q96DR8 90 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 ADAT3Q96EY9 351 aaPredicted RBP16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 UQCC2Q9BRT2 126 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 RGCCQ9H4X1 137 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 SLC2A8Q9NY64 477 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 FBLN5Q9UBX5 448 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 ZNF391Q9UJN7 358 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 RTTNQ86VV8 2226 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 C16orf97H3BN30 126 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 I3L521 148 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 DHRS3O75911 302 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 RPA2P15927 270 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 ZNF20P17024 532 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 CHRNB4P30926 498 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 GNALP38405 381 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 WNT5AP41221 380 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 SRSF4Q08170 494 aaKnown RBP16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 HLXQ14774 488 aaPredicted RBP16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 RFPL4BQ6ZWI9 263 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 FAM169BQ8N8A8 192 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 LRRC20Q8TCA0 184 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 CDH20Q9HBT6 801 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 COQ3Q9NZJ6 369 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 RHBDD3Q9Y3P4 386 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 V9GYS6 101 aa16.66■□□□□ 0.26
PDLIM2-204ENST00000397760 TMEM82A0PJX8 343 aa16.65■□□□□ 0.26
PDLIM2-204ENST00000397760 NGFP01138 241 aa16.65■□□□□ 0.26
PDLIM2-204ENST00000397760 ADORA2A-AS1P86434 159 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms