RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 OR2T27Q8NH04 317 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 OR4Q3Q8NH05 313 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 OTOSQ8NHW6 89 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 WIPF2Q8TF74 440 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-208ENST00000397204 THEM6Q8WUY1 208 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 HPSE2Q8WWQ2 592 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 AQP3Q92482 292 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 MALSU1Q96EH3 234 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 AMELYQ99218 206 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 NKX3-1Q99801 234 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-208ENST00000397204 RSRP1Q9BUV0 290 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 DGCR6LQ9BY27 220 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 PRSS22Q9GZN4 317 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 FGF23Q9GZV9 251 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-208ENST00000397204 MMP28Q9H239 520 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 YY1AP1Q9H869 796 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 ZNF702PQ9H963 129 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.08□□□□□ -1.28
CAPN3-208ENST00000397204 C19orf12Q9NSK7 152 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 AURKAIP1Q9NWT8 199 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-208ENST00000397204 USE1Q9NZ43 259 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 PITPNC1Q9UKF7 332 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 A0A0U1RQV5 110 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 OR5B21A6NL26 309 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 RFPL4AA6NLU0 287 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 ZNF732B4DXR9 585 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 RFPL4AL1F8VTS6 287 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 H3BUI4 141 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 SLC1A7O00341 560 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 CHST1O43916 411 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 NOS1APO75052 506 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-208ENST00000397204 PEX14O75381 377 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 LYNP07948 512 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 PAX6P26367 422 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 PRDX2P32119 198 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 MAGEA2P43356 314 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 BMXP51813 675 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 ERVFRD-1P60508 538 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 RIPPLY1Q0D2K3 151 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 CNN3Q15417 329 aaKnown RBP7.07□□□□□ -1.28
CAPN3-208ENST00000397204 FOXB2Q5VYV0 432 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 PGAM4Q8N0Y7 254 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 LYG1Q8N1E2 194 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 ZNF561Q8N587 486 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 AQP11Q8NBQ7 271 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 FAM81AQ8TBF8 368 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 PHF21AQ96BD5 680 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 LYZL4Q96KX0 146 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 CITED2Q99967 270 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-208ENST00000397204 KRTAP9-2Q9BYQ4 174 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 C1orf21Q9H246 121 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 MED20Q9H944 212 aa7.07□□□□□ -1.28
CAPN3-208ENST00000397204 ELL3Q9HB65 397 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-208ENST00000397204 A6NDX4 124 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 FAM183AA6NL82 134 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 SOX14O95416 240 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 ALDOBP05062 364 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 RAB13P51153 203 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 DYNLT3P51808 116 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 SMIM21Q3B7S5 101 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 LCN1P1Q5VSP4 162 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 DEGS2Q6QHC5 323 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 CCBE1Q6UXH8 406 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-208ENST00000397204 ACP7Q6ZNF0 438 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 ZNF573Q86YE8 665 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 MFSD4AQ8N468 514 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 CD177Q8N6Q3 437 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 POC1AQ8NBT0 407 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 OR8B12Q8NGG6 310 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 OR13D1Q8NGV5 346 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 RPS4Y2Q8TD47 263 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 OTULINQ96BN8 352 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 FOXRED1Q96CU9 486 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-208ENST00000397204 ELAC2Q9BQ52 826 aaKnown RBP7.06□□□□□ -1.28
CAPN3-208ENST00000397204 OR51V1Q9H2C8 321 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 ABCB10Q9NRK6 738 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 MBNL3Q9NUK0 354 aaKnown RBP7.06□□□□□ -1.28
CAPN3-208ENST00000397204 ARMC1Q9NVT9 282 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 ACTR3BQ9P1U1 418 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 ADAM30Q9UKF2 790 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 TCF19Q9Y242 345 aa7.06□□□□□ -1.28
CAPN3-208ENST00000397204 TBL2Q9Y4P3 447 aaKnown RBP7.06□□□□□ -1.28
CAPN3-208ENST00000397204 C17orf98A8MV24 154 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-208ENST00000397204 PRR23D1E9PI22 279 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-208ENST00000397204 PRODHO43272 600 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 RBP4P02753 201 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 TK1P04183 234 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 HMGN1P05114 100 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 PGA5P0DJD9 388 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 PRR23D2P0DMB1 279 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-208ENST00000397204 ALOX5APP20292 161 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 COX7A1P24310 79 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 DLX6P56179 175 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 CD83Q01151 205 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 PPP1R8Q12972 351 aaKnown RBP7.05□□□□□ -1.28
CAPN3-208ENST00000397204 GK3PQ14409 553 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 HABP2Q14520 560 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-208ENST00000397204 SSX2Q16385 188 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 CEP78Q5JTW2 689 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms