RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 HOXA4Q00056 320 aaPredicted RBP11.52□□□□□ -0.57
SEC13-204ENST00000397099 RAB40BQ12829 278 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 IL24Q13007 206 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 IKZF1Q13422 519 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 ZNF561Q8N587 486 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 FAM216BQ8N7L0 139 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 RHOXF1Q8NHV9 184 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 ZDHHC16Q969W1 377 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 PPP1R14AQ96A00 147 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 SDSLQ96GA7 329 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 CHST5Q9GZS9 411 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 FGF23Q9GZV9 251 aaPredicted RBP11.52□□□□□ -0.57
SEC13-204ENST00000397099 ACOXLQ9NUZ1 547 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 RPL36Q9Y3U8 105 aaKnown RBP11.52□□□□□ -0.57
SEC13-204ENST00000397099 POMT1Q9Y6A1 747 aa11.52□□□□□ -0.57
SEC13-204ENST00000397099 IGHV1-69DA0A0B4J2H0 117 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 M0R1W7 72 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 MAGEB4O15481 346 aaPredicted RBP11.51□□□□□ -0.57
SEC13-204ENST00000397099 RHBDL1O75783 438 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 NXPH2O95156 264 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 IGHV1-69P01742 117 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 HTR1AP08908 422 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 HKR1P10072 659 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 PSG2P11465 335 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 GABRA2P47869 451 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 RPL15P61313 204 aaKnown RBP11.51□□□□□ -0.57
SEC13-204ENST00000397099 ZNF85Q03923 595 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 GALEQ14376 348 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 KLHL22Q53GT1 634 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 LPCAT4Q643R3 524 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 NCR3LG1Q68D85 454 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 ACP7Q6ZNF0 438 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 Q8IYB0 196 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 SYS1Q8N2H4 156 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 DNAAF1Q8NEP3 725 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 ZNF555Q8NEP9 628 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 OR5T2Q8NGG2 359 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 OR2G2Q8NGZ5 317 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 GAFA1Q96PS6 74 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 TBX15Q96SF7 602 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 MBOAT4Q96T53 435 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 UNKLQ9H9P5 680 aaKnown RBP11.51□□□□□ -0.57
SEC13-204ENST00000397099 GPR173Q9NS66 373 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 ONECUT1Q9UBC0 465 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 ZNF222Q9UK12 451 aa11.51□□□□□ -0.57
SEC13-204ENST00000397099 IGHV3OR16-10A0A075B7F0 116 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 CENPVL3A0A0U1RRI6 287 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 hCG_1809904A0A1W2PP81 198 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 A0A1W2PPE2 198 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 A0A1W2PR64 198 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 A0A1W2PRV1 198 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 IRGMA1A4Y4 181 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 APOL3O95236 402 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 CYB5AP00167 134 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 NDUFB7P17568 137 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 GABRB1P18505 474 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 AMY2BP19961 511 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 PRKACBP22694 351 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 EEF1B2P24534 225 aaKnown RBP11.5□□□□□ -0.57
SEC13-204ENST00000397099 GMFBP60983 142 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 SLC9A3R2Q15599 337 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 FIP1L1Q6UN15 594 aaKnown RBP11.5□□□□□ -0.57
SEC13-204ENST00000397099 UTS2BQ765I0 119 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 ENTHD1Q8IYW4 607 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 BCL6BQ8N143 479 aaPredicted RBP11.5□□□□□ -0.57
SEC13-204ENST00000397099 PRSS35Q8N3Z0 413 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 H1FXQ92522 213 aaKnown RBP11.5□□□□□ -0.57
SEC13-204ENST00000397099 UBE2FQ969M7 185 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 BORCS8Q96FH0 119 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 ZNF48Q96MX3 618 aaPredicted RBP11.5□□□□□ -0.57
SEC13-204ENST00000397099 DUX5Q96PT3 197 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 NRIP2Q9BQI9 281 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 FAM234AQ9H0X4 552 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 METTL8Q9H825 291 aaKnown RBP11.5□□□□□ -0.57
SEC13-204ENST00000397099 SEBOXQ9HB31 216 aaPredicted RBP11.5□□□□□ -0.57
SEC13-204ENST00000397099 HES4Q9HCC6 221 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 SNTG1Q9NSN8 517 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 MRPS18AQ9NVS2 196 aaKnown RBP11.5□□□□□ -0.57
SEC13-204ENST00000397099 FAM118AQ9NWS6 357 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 SMPD3Q9NY59 655 aaPredicted RBP11.5□□□□□ -0.57
SEC13-204ENST00000397099 HHLA2Q9UM44 414 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 NBEAL1Q6ZS30 2694 aa11.5□□□□□ -0.57
SEC13-204ENST00000397099 IGKV1D-17A0A075B6S4 117 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 LOC107986453A0A1B0GWG9 222 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 A0A1W2PQ09 198 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 FCN3O75636 299 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 BAG2O95816 211 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 KNG1P01042 644 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 SFTPBP07988 381 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 DBTP11182 482 aaKnown RBP11.49□□□□□ -0.57
SEC13-204ENST00000397099 PRDX2P32119 198 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 ATP1B3P54709 279 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 ZNF91Q05481 1191 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 DGUOKQ16854 277 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 TP53I3Q53FA7 332 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 TTC23Q5W5X9 447 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 C16orf87Q6PH81 154 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 Q6YL49 198 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 VMO1Q7Z5L0 202 aa11.49□□□□□ -0.57
SEC13-204ENST00000397099 MKXQ8IYA7 352 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms