RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 OR5H6Q8NGV6 325 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 CNRIP1Q96F85 164 aaPredicted RBP6.43□□□□□ -1.38
UPF2-203ENST00000397053 C2orf50Q96LR7 162 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 GABRG3Q99928 467 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 ABHD14AQ9BUJ0 271 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 CXXC4Q9H2H0 198 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 PRDM4Q9UKN5 801 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 ZMIZ1Q9ULJ6 1067 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 WASHC3Q9Y3C0 194 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 C3P01024 1663 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 IGHV1OR15-9A0A0B4J2B8 117 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 IFITM5A6NNB3 132 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 PPM1DO15297 605 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 ZNF26P17031 533 aaPredicted RBP6.43□□□□□ -1.38
UPF2-203ENST00000397053 BSGP35613 385 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 LPAR6P43657 344 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 C21orf58P58505 322 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 ECSCRQ19T08 205 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 IZUMO4Q1ZYL8 232 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 CD276Q5ZPR3 534 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 CCDC144NLQ6NUI1 221 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 C5orf17Q8NAS9 161 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 TMEM116Q8NCL8 245 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 OR10Z1Q8NGY1 313 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 Q8WTZ3 238 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 HGDQ93099 445 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 SMIM19Q96E16 107 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 VPS25Q9BRG1 176 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 ZNF426Q9BUY5 554 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 NAA50Q9GZZ1 169 aaKnown RBP6.43□□□□□ -1.38
UPF2-203ENST00000397053 FBXL17Q9UF56 701 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 C21orf140B9A014 251 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 LALBAP00709 142 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 CD3DP04234 171 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 SLC6A12P48065 614 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 NOVP48745 357 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 ESPL1Q14674 2120 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 CDK5R1Q15078 307 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 LHX8Q68G74 356 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 TMUB2Q71RG4 321 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 SLC38A6Q8IZM9 456 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 NANOGP1Q8N7R0 232 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 SCARB1Q8WTV0 552 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 IL21Q9HBE4 155 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 TREM2Q9NZC2 230 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 OR5B21A6NL26 309 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 ZNF207O43670 478 aaKnown RBP6.42□□□□□ -1.38
UPF2-203ENST00000397053 PRSS1P07477 247 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 CPN1P15169 458 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 NPY1RP25929 384 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 CD82P27701 267 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 NKG7Q16617 165 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 HSD17B13Q7Z5P4 300 aaPredicted RBP6.42□□□□□ -1.38
UPF2-203ENST00000397053 OR4C12Q96R67 309 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 NPAS1Q99742 590 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 MRPL37Q9BZE1 423 aaKnown RBP6.42□□□□□ -1.38
UPF2-203ENST00000397053 AP5S1Q9NUS5 200 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 GIPP09681 153 aaPredicted RBP6.42□□□□□ -1.38
UPF2-203ENST00000397053 ZFP36L2P47974 494 aaKnown RBP6.42□□□□□ -1.38
UPF2-203ENST00000397053 SMAGPQ0VAQ4 97 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 PJVKQ0ZLH3 352 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 PDZK1IP1Q13113 114 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 PWWP2BQ6NUJ5 590 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 MUC15Q8N387 334 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 OR4S2Q8NH73 311 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 SIRT5Q9NXA8 310 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 ZNF629Q9UEG4 869 aaPredicted RBP6.42□□□□□ -1.38
UPF2-203ENST00000397053 MTCH2Q9Y6C9 303 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 NINQ8N4C6 2090 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 RER1O15258 196 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 TGOLN2O43493 480 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 ZNF205O95201 554 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 RNF224P0DH78 156 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 CCL4P13236 92 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 CCL2P13500 99 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 PPP1CCP36873 323 aaKnown RBP6.42□□□□□ -1.38
UPF2-203ENST00000397053 ID1P41134 155 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 ETV1P50549 477 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 DGCR2P98153 550 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 ROM1Q03395 351 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 MRPL58Q14197 206 aaKnown RBP6.42□□□□□ -1.38
UPF2-203ENST00000397053 MMDQ15546 238 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 ZNF658BQ4V348 819 aaPredicted RBP6.42□□□□□ -1.38
UPF2-203ENST00000397053 STAC2Q6ZMT1 411 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 ANKRD37Q7Z713 158 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 BCL7CQ8WUZ0 217 aaPredicted RBP6.42□□□□□ -1.38
UPF2-203ENST00000397053 TMEM18Q96B42 140 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 GPANK1O95872 356 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 TFAP2AP05549 437 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 GALNSP34059 522 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 KIR2DS2P43631 304 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 PSMB2P49721 201 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 DLX1P56177 255 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 LOXL3P58215 753 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 FUT7Q11130 342 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 PNLIPRP3Q17RR3 467 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 STPG1Q5TH74 334 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 SCGB1D4Q6XE38 83 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 DOLPP1Q86YN1 238 aa6.42□□□□□ -1.38
UPF2-203ENST00000397053 DDB2Q92466 427 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms