RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 ACBD7Q8N6N7 88 aa13.4□□□□□ -0.26
CLTA-203ENST00000396603 SGK3Q96BR1 496 aa13.4□□□□□ -0.26
CLTA-203ENST00000396603 MICU1Q9BPX6 476 aa13.4□□□□□ -0.26
CLTA-203ENST00000396603 DCTN5Q9BTE1 182 aa13.4□□□□□ -0.26
CLTA-203ENST00000396603 INPP5EQ9NRR6 644 aa13.4□□□□□ -0.26
CLTA-203ENST00000396603 RRP15Q9Y3B9 282 aaKnown RBP13.4□□□□□ -0.26
CLTA-203ENST00000396603 N6AMT1Q9Y5N5 214 aa13.4□□□□□ -0.26
CLTA-203ENST00000396603 TMEM269A0A1B0GVZ9 245 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 A0A1W2PQL4 384 aaPredicted RBP13.39□□□□□ -0.27
CLTA-203ENST00000396603 DAPL1A0PJW8 107 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 M0R1W7 72 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 GSK3AP49840 483 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 HCCSP53701 268 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 ACSM1Q08AH1 577 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 MED21Q13503 144 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 FAM76BQ5HYJ3 339 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 NCR3LG1Q68D85 454 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 DHRS7BQ6IAN0 325 aaPredicted RBP13.39□□□□□ -0.27
CLTA-203ENST00000396603 Q6ZSV7 163 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 TFAP2CQ92754 450 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 ITPKCQ96DU7 683 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 TBX5Q99593 518 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 CCL13Q99616 98 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 RTL8AQ9BWD3 113 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 TCF7L1Q9HCS4 588 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 BRD7Q9NPI1 651 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 MRPS18AQ9NVS2 196 aaKnown RBP13.39□□□□□ -0.27
CLTA-203ENST00000396603 ONECUT1Q9UBC0 465 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 COPS3Q9UNS2 423 aa13.39□□□□□ -0.27
CLTA-203ENST00000396603 EXOGQ9Y2C4 368 aaKnown RBP13.39□□□□□ -0.27
CLTA-203ENST00000396603 NKX6-3A6NJ46 265 aa13.38□□□□□ -0.27
CLTA-203ENST00000396603 METTL15A6NJ78 407 aa13.38□□□□□ -0.27
CLTA-203ENST00000396603 LOC110117498-PIK3R3F6TDL0 507 aa13.38□□□□□ -0.27
CLTA-203ENST00000396603 APOL3O95236 402 aa13.38□□□□□ -0.27
CLTA-203ENST00000396603 CAV3P56539 151 aa13.38□□□□□ -0.27
CLTA-203ENST00000396603 KRTAP10-3P60369 221 aa13.38□□□□□ -0.27
CLTA-203ENST00000396603 C2orf68Q2NKX9 166 aa13.38□□□□□ -0.27
CLTA-203ENST00000396603 C11orf88Q6PI97 169 aa13.38□□□□□ -0.27
CLTA-203ENST00000396603 KRT74Q7RTS7 529 aa13.38□□□□□ -0.27
CLTA-203ENST00000396603 YIPF7Q8N8F6 280 aa13.38□□□□□ -0.27
CLTA-203ENST00000396603 HAVCR2Q8TDQ0 301 aa13.38□□□□□ -0.27
CLTA-203ENST00000396603 NRG4Q8WWG1 115 aa13.38□□□□□ -0.27
CLTA-203ENST00000396603 MED30Q96HR3 178 aa13.38□□□□□ -0.27
CLTA-203ENST00000396603 PAPOLGQ9BWT3 736 aaKnown RBP13.38□□□□□ -0.27
CLTA-203ENST00000396603 IGHV3OR15-7A0A075B7D8 119 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 A0A0U1RQV5 110 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 PSMD9O00233 223 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 CDIPTO14735 213 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 NPFFO15130 113 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 CLIC3O95833 236 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 CST4P01036 141 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 ATP6V1B1P15313 513 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 VHLP40337 213 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 UBE2E1P51965 193 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 AQP4P55087 323 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 ISL1P61371 349 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 CSNK2BP67870 215 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 MRPL28Q13084 256 aaKnown RBP13.37□□□□□ -0.27
CLTA-203ENST00000396603 ZNF788Q6ZQV5 615 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 THAP5Q7Z6K1 395 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 FAM216BQ8N7L0 139 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 DTX3Q8N9I9 347 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 LGALS12Q96DT0 336 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 METTL8Q9H825 291 aaKnown RBP13.37□□□□□ -0.27
CLTA-203ENST00000396603 FBLN5Q9UBX5 448 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 SNX5Q9Y5X3 404 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 R4GMQ9 66 aa13.37□□□□□ -0.27
CLTA-203ENST00000396603 RNASEK-C17orf49H0YIS7 233 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 J3QRE1 110 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 WBP4O75554 376 aaKnown RBP13.36□□□□□ -0.27
CLTA-203ENST00000396603 MTRF1O75570 445 aaKnown RBP13.36□□□□□ -0.27
CLTA-203ENST00000396603 AMY2BP19961 511 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 AANATQ16613 207 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 BCL2L15Q5TBC7 163 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 IZUMO2Q6UXV1 221 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 COMMD2Q86X83 199 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 Q8N7P7 452 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 CNIH3Q8TBE1 160 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 APH1BQ8WW43 257 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 TNFRSF14Q92956 283 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 TTTY10Q9BZA0 68 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 PBOV1Q9GZY1 135 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 AMBNQ9NP70 447 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 FAM206AQ9NX38 181 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 CHCHD3Q9NX63 227 aaKnown RBP13.36□□□□□ -0.27
CLTA-203ENST00000396603 DNAJB11Q9UBS4 358 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 NUFIP1Q9UHK0 495 aaKnown RBP13.36□□□□□ -0.27
CLTA-203ENST00000396603 MRM2Q9UI43 246 aaKnown RBP13.36□□□□□ -0.27
CLTA-203ENST00000396603 GNG8Q9UK08 70 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 RHBDD3Q9Y3P4 386 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 NOTCH1P46531 2555 aa13.36□□□□□ -0.27
CLTA-203ENST00000396603 TRBV23-1A0A0A0MS06 115 aa13.35□□□□□ -0.27
CLTA-203ENST00000396603 EFCAB10A6NFE3 127 aa13.35□□□□□ -0.27
CLTA-203ENST00000396603 SIGLEC5O15389 551 aa13.35□□□□□ -0.27
CLTA-203ENST00000396603 PAHP00439 452 aa13.35□□□□□ -0.27
CLTA-203ENST00000396603 IGHA1P01876 353 aa13.35□□□□□ -0.27
CLTA-203ENST00000396603 RPSAP08865 295 aaKnown RBP13.35□□□□□ -0.27
CLTA-203ENST00000396603 MYL12AP19105 171 aa13.35□□□□□ -0.27
CLTA-203ENST00000396603 DCKP27707 260 aa13.35□□□□□ -0.27
CLTA-203ENST00000396603 BLMHQ13867 455 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms