RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 STK11Q15831 433 aa13.34□□□□□ -0.27
UBE2D3-207ENST00000394801 DCAF10Q5QP82 559 aa13.34□□□□□ -0.27
UBE2D3-207ENST00000394801 ELL3Q9HB65 397 aaPredicted RBP13.34□□□□□ -0.27
UBE2D3-207ENST00000394801 B4GALT7Q9UBV7 327 aa13.34□□□□□ -0.27
UBE2D3-207ENST00000394801 IGKV1-27A0A075B6S5 117 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 hCG_38984A0A1B0GV85 526 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 FIGNL2A6NMB9 653 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 SFT2D2O95562 160 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 MT-CO3P00414 261 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 FGF2P09038 288 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 RBP2P50120 134 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 CLDN18P56856 261 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 FAM3AP98173 230 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 PLXDC2Q6UX71 529 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 ACOT7LQ6ZUV0 252 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 LHFPL2Q6ZUX7 228 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 CSNK2A3Q8NEV1 391 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 CXorf58Q96LI9 332 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 ATPIF1Q9UII2 106 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 HSF4Q9ULV5 492 aa13.33□□□□□ -0.28
UBE2D3-207ENST00000394801 MRPL33O75394 65 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 SUPT4H1P63272 117 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 SURF2Q15527 256 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 OR8B8Q15620 311 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 TSPO2Q5TGU0 170 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 KCTD9Q7L273 389 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 C6orf201Q7Z4U5 140 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 HSD17B13Q7Z5P4 300 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 NMES1Q9C002 83 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 ABI3Q9P2A4 366 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 NOSIPQ9Y314 301 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 RNF222A6NCQ9 220 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 RPL36A-HNRNPH2H7BZ11 118 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 RRP8O43159 456 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 FARS2O95363 451 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 NRASP01111 189 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 UBA52P62987 128 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 RPUSD3Q6P087 351 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 CLEC18BQ6UXF7 455 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 EIF4E3Q8N5X7 224 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 COQ8AQ8NI60 647 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 SPSB4Q96A44 273 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 C1QTNF5Q9BXJ0 243 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 PLEKHJ1Q9NW61 149 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 PARPBPQ9NWS1 579 aa13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 MCTS1Q9ULC4 181 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-207ENST00000394801 NCOR1O75376 2440 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 CRHP06850 196 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 ZNF708P17019 499 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 CYCSP99999 105 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 ZNF92Q03936 586 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 OR1C1Q15619 314 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 COLCA1Q6ZS62 124 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 BVESQ8NE79 360 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 ST8SIA2Q92186 375 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 BORCS8Q96FH0 119 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 CDC6Q99741 560 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 PRDM14Q9GZV8 571 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 RAB18Q9NP72 206 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 EHFQ9NZC4 300 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 EDARQ9UNE0 448 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 TRBV6-7A0A0A0MS04 114 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 FAM230AA0A1W2PPH8 454 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 FAM25EA8MYX2 175 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 SDCBPO00560 298 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 XRCC2O43543 280 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 CSTBP04080 98 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 SERPINA5P05154 406 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 CELA3AP09093 270 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 GABRR1P24046 479 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 PSMB6P28072 239 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 SERPINF1P36955 418 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 AIMP2Q13155 320 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 RSU1Q15404 277 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 CHRFAM7AQ494W8 412 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 LRRC37A5PQ49AS3 106 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 ZSCAN4Q8NAM6 433 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 THAP6Q8TBB0 222 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 EMG1Q92979 244 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 HES7Q9BYE0 225 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 WDR13Q9H1Z4 485 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 RNF122Q9H9V4 155 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 IL36GQ9NZH8 169 aa13.31□□□□□ -0.28
UBE2D3-207ENST00000394801 KANTRA0A1W2PQU2 76 aa13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 BCL2L11O43521 198 aa13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 NDUFA2O43678 99 aa13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 ANGPTL7O43827 346 aa13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 SPDEFO95238 335 aa13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 HTR3BO95264 441 aa13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 RLN2P04090 185 aa13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 RPS2P15880 293 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 FUT6P51993 359 aa13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 PABPC1L2AQ5JQF8 200 aa13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 CPEB3Q8NE35 698 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 PXT1Q8NFP0 134 aa13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 OR10Z1Q8NGY1 313 aa13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 MRPS24Q96EL2 167 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 IP6K3Q96PC2 410 aa13.3□□□□□ -0.28
UBE2D3-207ENST00000394801 TECTBQ96PL2 329 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms