RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 ZNF701Q9NV72 531 aaPredicted RBP12.8□□□□□ -0.36
CDH16-202ENST00000394055 ZNF581Q9P0T4 197 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 MBD2Q9UBB5 411 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 BOKQ9UMX3 212 aaPredicted RBP12.8□□□□□ -0.36
CDH16-202ENST00000394055 FREM1Q5H8C1 2179 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 MED13Q9UHV7 2174 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 FAM74A7A6NL05 159 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 A8MXK9 166 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 IL2RAP01589 272 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 SNU13P55769 128 aaKnown RBP12.8□□□□□ -0.36
CDH16-202ENST00000394055 FAM74A3Q4VXF1 159 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 SKA3Q8IX90 412 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 FAM89BQ8N5H3 189 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 CSNK2A3Q8NEV1 391 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 OR2M7Q8NG81 312 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 MITD1Q8WV92 249 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 PPP1R1CQ8WVI7 109 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 CXorf58Q96LI9 332 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 HDHD3Q9BSH5 251 aaPredicted RBP12.8□□□□□ -0.36
CDH16-202ENST00000394055 GPR35Q9HC97 309 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 BIN3Q9NQY0 253 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 ZNF407Q9C0G0 2248 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 FAM186AA6NE01 2351 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 C13orf42A0A1B0GVH6 325 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 CDX4O14627 284 aaPredicted RBP12.8□□□□□ -0.36
CDH16-202ENST00000394055 PNLIPRP3Q17RR3 467 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 PABPC1L2AQ5JQF8 200 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 COMMD9Q9P000 198 aa12.8□□□□□ -0.36
CDH16-202ENST00000394055 DNAJC13O75165 2243 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 KCNAB3O43448 404 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 RPA2P15927 270 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 OR3A2P47893 321 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 GK2Q14410 553 aaPredicted RBP12.79□□□□□ -0.36
CDH16-202ENST00000394055 SLC9A3R2Q15599 337 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 TSPO2Q5TGU0 170 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 CPNE4Q96A23 557 aaPredicted RBP12.79□□□□□ -0.36
CDH16-202ENST00000394055 OCSTAMPQ9BR26 566 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 OR2H1Q9GZK4 316 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 WNT5BQ9H1J7 359 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 C5orf66Q9H5L9 145 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 IL17BQ9UHF5 180 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 PFDN2Q9UHV9 154 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 ANAPC10Q9UM13 185 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 IGKV1-27A0A075B6S5 117 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 FOXI3A8MTJ6 420 aaPredicted RBP12.79□□□□□ -0.36
CDH16-202ENST00000394055 CD8AP01732 235 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 TMEM164Q5U3C3 297 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 OR13G1Q8NGZ3 307 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 EHFQ9NZC4 300 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 GHRLQ9UBU3 117 aa12.79□□□□□ -0.36
CDH16-202ENST00000394055 C5orf51A6NDU8 294 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 OR6C6A6NF89 314 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 CYTIPO60759 359 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 CPT2P23786 658 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 ALDH3B1P43353 468 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 MAGEA5P43359 124 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 FAM189A2Q15884 450 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 VAX1Q5SQQ9 334 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 RGS7BPQ6MZT1 257 aaPredicted RBP12.78□□□□□ -0.36
CDH16-202ENST00000394055 ZNF703Q9H7S9 590 aaPredicted RBP12.78□□□□□ -0.36
CDH16-202ENST00000394055 NDRG3Q9UGV2 375 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 MCTS1Q9ULC4 181 aaKnown RBP12.78□□□□□ -0.36
CDH16-202ENST00000394055 TIMM10BQ9Y5J6 103 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 IGKV1D-8A0A087WSZ0 117 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 MT-CO3P00414 261 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 RLN2P04090 185 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 ZNF92Q03936 586 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 OR1C1Q15619 314 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 TAF9Q16594 264 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 ZNF660Q6AZW8 331 aaPredicted RBP12.78□□□□□ -0.36
CDH16-202ENST00000394055 C11orf87Q6NUJ2 197 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 SULF2Q8IWU5 870 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 ZNF565Q8N9K5 539 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 TMEM230Q96A57 120 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 FAM173AQ9BQD7 235 aa12.78□□□□□ -0.36
CDH16-202ENST00000394055 PURGQ9UJV8 347 aaKnown RBP12.78□□□□□ -0.36
CDH16-202ENST00000394055 A0A096LPE4 126 aa12.77□□□□□ -0.36
CDH16-202ENST00000394055 A0A1W2PPZ6 126 aa12.77□□□□□ -0.36
CDH16-202ENST00000394055 DUS4LO95620 317 aaKnown RBP12.77□□□□□ -0.36
CDH16-202ENST00000394055 NMBP08949 121 aa12.77□□□□□ -0.36
CDH16-202ENST00000394055 FGL1Q08830 312 aa12.77□□□□□ -0.36
CDH16-202ENST00000394055 C3AR1Q16581 482 aa12.77□□□□□ -0.36
CDH16-202ENST00000394055 DCAF10Q5QP82 559 aa12.77□□□□□ -0.36
CDH16-202ENST00000394055 LPCAT3Q6P1A2 487 aa12.77□□□□□ -0.36
CDH16-202ENST00000394055 FAM219AQ8IW50 185 aa12.77□□□□□ -0.36
CDH16-202ENST00000394055 BATF2Q8N1L9 274 aa12.77□□□□□ -0.36
CDH16-202ENST00000394055 ARRDC1Q8N5I2 433 aa12.77□□□□□ -0.36
CDH16-202ENST00000394055 CALHM2Q9HA72 323 aa12.77□□□□□ -0.36
CDH16-202ENST00000394055 PLEKHJ1Q9NW61 149 aa12.77□□□□□ -0.36
CDH16-202ENST00000394055 TRBV23-1A0A0A0MS06 115 aa12.77□□□□□ -0.37
CDH16-202ENST00000394055 MRPL33O75394 65 aaKnown RBP12.77□□□□□ -0.37
CDH16-202ENST00000394055 SERPINA5P05154 406 aa12.77□□□□□ -0.37
CDH16-202ENST00000394055 ZNF806P0C7X5 589 aa12.77□□□□□ -0.37
CDH16-202ENST00000394055 MPGP29372 298 aa12.77□□□□□ -0.37
CDH16-202ENST00000394055 SERPINF1P36955 418 aa12.77□□□□□ -0.37
CDH16-202ENST00000394055 RSU1Q15404 277 aa12.77□□□□□ -0.37
CDH16-202ENST00000394055 ACTBL2Q562R1 376 aa12.77□□□□□ -0.37
CDH16-202ENST00000394055 Q6ZSR3 168 aa12.77□□□□□ -0.37
CDH16-202ENST00000394055 RELL2Q8NC24 303 aaPredicted RBP12.77□□□□□ -0.37
CDH16-202ENST00000394055 SCARB1Q8WTV0 552 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms