RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 LRRC30A6NM36 301 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.16□□□□□ -0.62
USP44-202ENST00000393091 NDUFA2O43678 99 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 GPM6AP51674 278 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 PRSS12P56730 875 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 LRRC28Q86X40 367 aaPredicted RBP11.16□□□□□ -0.62
USP44-202ENST00000393091 OR51A2Q8NGJ7 313 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 TMIGD2Q96BF3 282 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 CEPT1Q9Y6K0 416 aa11.16□□□□□ -0.62
USP44-202ENST00000393091 SLC17A2O00624 439 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 CDKN1AP38936 164 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 GPR176Q14439 515 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 INSL4Q14641 139 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 GCSAMQ8N6F7 178 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 OR52N4Q8NGI2 321 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 OR13C9Q8NGT0 318 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 CMTM3Q96MX0 182 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 TCF7L1Q9HCS4 588 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 PPP1R3CQ9UQK1 317 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 AIREO43918 545 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 ZNF780AO75290 641 aaPredicted RBP11.15□□□□□ -0.62
USP44-202ENST00000393091 ZNF146Q15072 292 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 ZNF404Q494X3 552 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 GLT8D1Q68CQ7 371 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 CALHM1Q8IU99 346 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 OR6M1Q8NGM8 313 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 NUDT16L1Q9BRJ7 211 aaKnown RBP11.15□□□□□ -0.62
USP44-202ENST00000393091 NCOR1P1Q9H4R4 102 aa11.15□□□□□ -0.62
USP44-202ENST00000393091 SMIM31A0A1B0GVY4 71 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 TPD52L2O43399 206 aaKnown RBP11.14□□□□□ -0.63
USP44-202ENST00000393091 BPNT1O95861 308 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 KNG1P01042 644 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 COL8A2P25067 703 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 PTGFRP43088 359 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 SOX2P48431 317 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 HFEQ30201 348 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 SPIN3Q5JUX0 258 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 SPNS3Q6ZMD2 512 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 MUC20Q8N307 709 aaPredicted RBP11.14□□□□□ -0.63
USP44-202ENST00000393091 PCDHB16Q9NRJ7 776 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 ZNF222Q9UK12 451 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 MAGEB3O15480 346 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 MYL9P24844 172 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 LMO1P25800 156 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 ZNF93P35789 620 aaPredicted RBP11.14□□□□□ -0.63
USP44-202ENST00000393091 CCL8P80075 99 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 DDI2Q5TDH0 399 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 GPR107Q5VW38 600 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 YLPM1P49750 1951 aaKnown RBP11.14□□□□□ -0.63
USP44-202ENST00000393091 POM121CA8CG34 1229 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 A8MXK9 166 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 AIPO00170 330 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 MTCP1P56278 107 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 IL13RA2Q14627 380 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 MPPED2Q15777 294 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 KCNJ8Q15842 424 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 STUMQ69YW2 141 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 NRGNQ92686 78 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 KCTD12Q96CX2 325 aaKnown RBP11.14□□□□□ -0.63
USP44-202ENST00000393091 CENPOQ9BU64 300 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 TM2D1Q9BX74 207 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 C1orf123Q9NWV4 160 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 MTCH1Q9NZJ7 389 aa11.14□□□□□ -0.63
USP44-202ENST00000393091 LRBAP50851 2863 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 NOTOA8MTQ0 251 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 CLDN25C9JDP6 229 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 LGALS8O00214 317 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 GLAP06280 429 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 RAB6AP20340 208 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 LOXL1Q08397 574 aaPredicted RBP11.13□□□□□ -0.63
USP44-202ENST00000393091 C22orf42Q6IC83 251 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 ACP7Q6ZNF0 438 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 MOGAT3Q86VF5 341 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 NR2C2APQ86WQ0 139 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 TMEM203Q969S6 136 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 VRK1Q99986 396 aaPredicted RBP11.13□□□□□ -0.63
USP44-202ENST00000393091 V9GY05 133 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 UNC79Q9P2D8 2635 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 CRYBG3Q68DQ2 2970 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 IGKV1-12A0A0C4DH73 117 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 IGKV1D-12P01611 117 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 CALCBP10092 127 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 MDH2P40926 338 aaKnown RBP11.13□□□□□ -0.63
USP44-202ENST00000393091 ATP5J2P56134 94 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 FGF12P61328 243 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 FAM27D1Q5T7N8 215 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 PRAMEF6Q5VXH4 476 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 RPL3LQ92901 407 aaKnown RBP11.13□□□□□ -0.63
USP44-202ENST00000393091 SDSLQ96GA7 329 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 CEP19Q96LK0 163 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 HMG20AQ9NP66 347 aa11.13□□□□□ -0.63
USP44-202ENST00000393091 PNMA8CA0A1B0GUJ8 204 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 FOXI3A8MTJ6 420 aaPredicted RBP11.12□□□□□ -0.63
USP44-202ENST00000393091 TMEM14DPA8MWL7 114 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 RAB3BP20337 219 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 CALRP27797 417 aaKnown RBP11.12□□□□□ -0.63
USP44-202ENST00000393091 NR4A2P43354 598 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 HAAOP46952 286 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 USP43Q70EL4 1123 aa11.12□□□□□ -0.63
USP44-202ENST00000393091 ZCCHC24Q8N2G6 241 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms