RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 AARDQ4LEZ3 155 aa6.93□□□□□ -1.3
PDLIM5-204ENST00000380176 C9orf135Q5VTT2 229 aa6.93□□□□□ -1.3
PDLIM5-204ENST00000380176 SLC16A14Q7RTX9 510 aa6.93□□□□□ -1.3
PDLIM5-204ENST00000380176 C6orf201Q7Z4U5 140 aa6.93□□□□□ -1.3
PDLIM5-204ENST00000380176 NAXEQ8NCW5 288 aa6.93□□□□□ -1.3
PDLIM5-204ENST00000380176 SEMA6DQ8NFY4 1073 aa6.93□□□□□ -1.3
PDLIM5-204ENST00000380176 OR52H1Q8NGJ2 320 aa6.93□□□□□ -1.3
PDLIM5-204ENST00000380176 ADAMTS17Q8TE56 1095 aa6.93□□□□□ -1.3
PDLIM5-204ENST00000380176 PECRQ9BY49 303 aa6.93□□□□□ -1.3
PDLIM5-204ENST00000380176 PRR13Q9NZ81 148 aa6.93□□□□□ -1.3
PDLIM5-204ENST00000380176 SPEF1Q9Y4P9 236 aa6.93□□□□□ -1.3
PDLIM5-204ENST00000380176 IGKV1D-8A0A087WSZ0 117 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 FAM230AA0A1W2PPH8 454 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 ZSCAN5BA6NJL1 495 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 RFPL4AA6NLU0 287 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 RFPL4AL1F8VTS6 287 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 MT-CO3P00414 261 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 CD8AP01732 235 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 SELLP14151 372 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 GABRR1P24046 479 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 ITGA3P26006 1051 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 LHX2P50458 406 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 FOXG1P55316 489 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 MTCP1P56278 107 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 PNLIPRP3Q17RR3 467 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 KRTAP27-1Q3LI81 207 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 TOR2AQ5JU69 321 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 DCAF10Q5QP82 559 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 ABHD17BQ5VST6 288 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 KCTD9Q7L273 389 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 COMMD7Q86VX2 200 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 TERB2Q8NHR7 220 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 MITD1Q8WV92 249 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 CPNE4Q96A23 557 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 DMRTA2Q96SC8 542 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 HDHD3Q9BSH5 251 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 C1QTNF6Q9BXI9 259 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 OR2H1Q9GZK4 316 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 MFFQ9GZY8 342 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 SLC6A15Q9H2J7 730 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 C5orf66Q9H5L9 145 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 BOKQ9UMX3 212 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 TTC28Q96AY4 2481 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 ZNF587BE7ETH6 402 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 MSTNO14793 375 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 APOC1P02654 83 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 TBPP20226 339 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 SNU13P55769 128 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 ZNF92Q03936 586 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 SCRN3Q0VDG4 424 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 ZMYND11Q15326 602 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 OR1C1Q15619 314 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 CPEB3Q8NE35 698 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 OR13G1Q8NGZ3 307 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 TMEM230Q96A57 120 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 FAM173AQ9BQD7 235 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 PDCD10Q9BUL8 212 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 TM2D1Q9BX74 207 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 MCTS1Q9ULC4 181 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 ARHGAP21Q5T5U3 1957 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 KCNAB3O43448 404 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 HTR3BO95264 441 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 TMEM225BP0DP42 221 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 ZNF250P15622 560 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 RPA2P15927 270 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 AMY2BP19961 511 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 ATP1B3P54709 279 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 CLDN18P56856 261 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 GMFBP60983 142 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 SRSF4Q08170 494 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 C3AR1Q16581 482 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 VAX1Q5SQQ9 334 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 ATP1A1-AS1Q5TC04 95 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 AADACL3Q5VUY0 350 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 ZNF546Q86UE3 836 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 PPP1R1CQ8WVI7 109 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 S100A13Q99584 98 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 GPR87Q9BY21 358 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 TTTY12Q9BZ98 90 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 WDR13Q9H1Z4 485 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 SLC7A10Q9NS82 523 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 GHRLQ9UBU3 117 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 GPR132Q9UNW8 380 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 TIMM10BQ9Y5J6 103 aa6.92□□□□□ -1.3
PDLIM5-204ENST00000380176 LAMA5O15230 3695 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 TRIM77I1YAP6 450 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 RP2O75695 350 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 TNFSF15O95150 251 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 SPDEFO95238 335 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 MMP7P09237 267 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 RRASP10301 218 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 C4BPBP20851 252 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 MPGP29372 298 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 RAB14P61106 215 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 FAM3AP98173 230 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 RIPPLY1Q0D2K3 151 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 EIF3IQ13347 325 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 ATXN7L3Q14CW9 347 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 BEX5Q5H9J7 111 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 NKAPLQ5M9Q1 402 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms