RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 GABRG2P18507 467 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 HAAOP46952 286 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 ZNF90Q03938 601 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 HABP2Q14520 560 aaPredicted RBP7.48□□□□□ -1.21
VPS36-201ENST00000378060 RAB35Q15286 201 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 TRIM61Q5EBN2 209 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 ZNF770Q6IQ21 691 aaPredicted RBP7.48□□□□□ -1.21
VPS36-201ENST00000378060 PRSS41Q7RTY9 318 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 OR4D9Q8NGE8 314 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 SLC39A7Q92504 469 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 APOBEC3DQ96AK3 386 aaPredicted RBP7.48□□□□□ -1.21
VPS36-201ENST00000378060 MOGAT1Q96PD6 335 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 RAB40CQ96S21 281 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 LRRC61Q9BV99 259 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 ANKRD10Q9NXR5 420 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 FLRT3Q9NZU0 649 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 PPP1R3CQ9UQK1 317 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 C5orf49A4QMS7 147 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 CLEC18AA5D8T8 446 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 CLDN34H7C241 214 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 ZNF250P15622 560 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 GALNSP34059 522 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 EDDM3AQ14507 147 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 PDZD11Q5EBL8 140 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 C6orf15Q6UXA7 325 aaPredicted RBP7.48□□□□□ -1.21
VPS36-201ENST00000378060 CDC20BQ86Y33 519 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 CLEC18CQ8NCF0 446 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 EXTL1Q92935 676 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 GPR137Q96N19 417 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 ZNF586Q9NXT0 402 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 RASL12Q9NYN1 266 aa7.48□□□□□ -1.21
VPS36-201ENST00000378060 MBD1Q9UIS9 605 aaPredicted RBP7.48□□□□□ -1.21
VPS36-201ENST00000378060 CKAP5Q14008 2032 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 A0A1B0GTH9 108 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 hCG_1809904A0A1W2PP81 198 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 A0A1W2PPE2 198 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 A0A1W2PR64 198 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 A0A1W2PRV1 198 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 NKX6-3A6NJ46 265 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 PLPP3O14495 311 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 FABP1P07148 127 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 POU2F2P09086 479 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 CT62P0C5K7 136 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 MGST1P10620 155 aaKnown RBP7.47□□□□□ -1.21
VPS36-201ENST00000378060 NQO2P16083 231 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 NOVA1P51513 510 aaKnown RBP7.47□□□□□ -1.21
VPS36-201ENST00000378060 RPS23P62266 143 aaKnown RBP7.47□□□□□ -1.21
VPS36-201ENST00000378060 SMIM15Q7Z3B0 74 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 ATG4DQ86TL0 474 aaPredicted RBP7.47□□□□□ -1.21
VPS36-201ENST00000378060 ZNF429Q86V71 674 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 CMTM2Q8TAZ6 248 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 SLC35E1Q96K37 410 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 VSTM2LQ96N03 204 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 NMES1Q9C002 83 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 SHARPINQ9H0F6 387 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 GHITMQ9H3K2 345 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 NTMQ9P121 344 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 TPRP12270 2363 aaKnown RBP7.47□□□□□ -1.21
VPS36-201ENST00000378060 TTC28Q96AY4 2481 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 A0A1W2PQD3 144 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 K7EQM0 130 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 TNFSF14O43557 240 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 FOSL1P15407 271 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 PSG6Q00889 435 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 FMODQ06828 376 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 AARDQ4LEZ3 155 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 MOB1BQ7L9L4 216 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 KDF1Q8NAX2 398 aaPredicted RBP7.47□□□□□ -1.21
VPS36-201ENST00000378060 OR8U1Q8NH10 309 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 OR2V1Q8NHB1 315 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 RPS4Y2Q8TD47 263 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 THOC3Q96J01 351 aaKnown RBP7.47□□□□□ -1.21
VPS36-201ENST00000378060 FOXB1Q99853 325 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 CNTD2Q9H8S5 307 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 UQCC1Q9NVA1 299 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 FRRS1LQ9P0K9 344 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 PMS2P1A4D2B8 440 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 LRRC30A6NM36 301 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 ANGPTL7O43827 346 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 CST7O76096 145 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 GPANK1O95872 356 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 GLRA1P23415 457 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 GPR12P47775 334 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 CEACAM16Q2WEN9 425 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 CD200R1LQ6Q8B3 271 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 CBLN3Q6UW01 205 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 DBX2Q6ZNG2 339 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 SLC25A42Q86VD7 318 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 Q8IYB0 196 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 LINC00052Q96N35 136 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 SOX7Q9BT81 388 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 VN1R1Q9GZP7 353 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 CCDC187A0A096LP49 1063 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 G3V3Q6 166 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 TXNDC12O95881 172 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 HOXB3P14651 431 aaPredicted RBP7.47□□□□□ -1.21
VPS36-201ENST00000378060 B4GALT1P15291 398 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 RAB5AP20339 215 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 CDAP32320 146 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 NPBWR1P48145 328 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms