RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 HLA-DRB5Q30154 266 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 OR2A5Q96R48 311 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 PRRX2Q99811 253 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 FAM117AQ9C073 453 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 OR2D2Q9H210 308 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 IL17BQ9UHF5 180 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 RBFOX3A6NFN3 312 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 PI3P19957 117 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 BTG2P78543 158 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 TBX15Q96SF7 602 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 C20orf141Q9NUB4 165 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 C11orf94C9JXX5 98 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 ONECUT2O95948 504 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 FGF21Q9NSA1 209 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 RAB9AP51151 201 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 IL13RA2Q14627 380 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 GABRA6Q16445 453 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 FNDC7Q5VTL7 733 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 MRGPRX4Q96LA9 322 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 KMT2EQ8IZD2 1858 aa10.49□□□□□ -0.73
VPS13A-205ENST00000376636 CICQ96RK0 1608 aaPredicted RBP10.48□□□□□ -0.73
VPS13A-205ENST00000376636 CEBPBP17676 345 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 OR2W3Q7Z3T1 314 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 SPICQ8N5J4 248 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 ANKLE1Q8NAG6 615 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 ROBO4Q8WZ75 1007 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 LAT2Q9GZY6 243 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 FAM206AQ9NX38 181 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 PAM16Q9Y3D7 125 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 DOCK10Q96BY6 2186 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 OOEPA6NGQ2 149 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 AKR7A2O43488 359 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 C15orf39Q6ZRI6 1047 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 SARAFQ96BY9 339 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 MOB4Q9Y3A3 225 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 UBE2L6O14933 153 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 TCF21O43680 179 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 APCSP02743 223 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 COL8A1P27658 744 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 DCTDP32321 178 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 LOC107984156A0A0G2JMH3 177 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 NDUFB3O43676 98 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 ZNF253O75346 499 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 GZMKP49863 264 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 UBE2L3P68036 154 aaKnown RBP10.48□□□□□ -0.73
VPS13A-205ENST00000376636 ARL17AQ8IVW1 177 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 OR1L6Q8NGR2 347 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 KIR3DX1Q9H7L2 352 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 RAG2P55895 527 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 ISL1P61371 349 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 XKR7Q5GH72 579 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 KLF16Q9BXK1 252 aaPredicted RBP10.48□□□□□ -0.73
VPS13A-205ENST00000376636 HAPLN2Q9GZV7 340 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 SOX21Q9Y651 276 aaPredicted RBP10.48□□□□□ -0.73
VPS13A-205ENST00000376636 PIK3IP1Q96FE7 263 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 PRDM7Q9NQW5 492 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 TECRQ9NZ01 308 aaKnown RBP10.48□□□□□ -0.73
VPS13A-205ENST00000376636 TCFL5Q9UL49 500 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 HS3ST2Q9Y278 367 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 KNDC1Q76NI1 1749 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 SYNGR2O43760 224 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 FAM157BP0CG42 384 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 CEACAM6P40199 344 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 FAM3BP58499 235 aaPredicted RBP10.48□□□□□ -0.73
VPS13A-205ENST00000376636 OR10G8Q8NGN5 311 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 RPEQ96AT9 228 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 ADAM20O43506 726 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 SEMG1P04279 462 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 CD22P20273 847 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 NKAIN2Q5VXU1 208 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 EMC6Q9BV81 110 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 TUBGCP6Q96RT7 1819 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 SMPD2O60906 423 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 ZNF865P0CJ78 1059 aaPredicted RBP10.48□□□□□ -0.73
VPS13A-205ENST00000376636 FUT3P21217 361 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 CDK5R1Q15078 307 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 ABHD17CQ6PCB6 329 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 SLC16A11Q8NCK7 471 aa10.48□□□□□ -0.73
VPS13A-205ENST00000376636 KISS1RQ969F8 398 aaPredicted RBP10.48□□□□□ -0.73
VPS13A-205ENST00000376636 SNAI1O95863 264 aaPredicted RBP10.47□□□□□ -0.73
VPS13A-205ENST00000376636 ARSAP15289 507 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 NMUP48645 174 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 NPEPL1Q8NDH3 523 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 MYOZ1Q9NP98 299 aaPredicted RBP10.47□□□□□ -0.73
VPS13A-205ENST00000376636 ANKRD10Q9NXR5 420 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 ZAR1LA6NP61 321 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 HLA-DRB3P79483 266 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 SOX4Q06945 474 aaPredicted RBP10.47□□□□□ -0.73
VPS13A-205ENST00000376636 JOSD1Q15040 202 aaPredicted RBP10.47□□□□□ -0.73
VPS13A-205ENST00000376636 OR52N5Q8NH56 324 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 ZNF519Q8TB69 540 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 RPS4Y2Q8TD47 263 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 BCL7CQ8WUZ0 217 aaPredicted RBP10.47□□□□□ -0.73
VPS13A-205ENST00000376636 K7ESF4 209 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 TNFSF11O14788 317 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 C1SP09871 688 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 MYBPHQ13203 477 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 INSM2Q96T92 566 aaPredicted RBP10.47□□□□□ -0.73
VPS13A-205ENST00000376636 THBS4P35443 961 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 LBX1P52954 281 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms