RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 HGDQ93099 445 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 UFC1Q9Y3C8 167 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 H3BVH4 76 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 J3KRW8 73 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 DRD3P35462 400 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 NT5CQ8TCD5 201 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 MRGPRX4Q96LA9 322 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 TRAV17A0A0B4J275 112 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 RNASEK-C17orf49H0YIS7 233 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 VAMP5O95183 116 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 MMP7P09237 267 aaPredicted RBP12.82□□□□□ -0.36
TRAF1-201ENST00000373887 ELFN2Q5R3F8 820 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 CLDN23Q96B33 292 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 TMEM147Q9BVK8 224 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 C20orf141Q9NUB4 165 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 HTR1DP28221 377 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 ZNF154Q13106 437 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 SMIM21Q3B7S5 101 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 SMRP1Q8NCR6 262 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 OR5D13Q8NGL4 314 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 PELI1Q96FA3 418 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 CXorf58Q96LI9 332 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 H3BMH7 237 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 CYC1P08574 325 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 CD40P25942 277 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 CEBPDP49716 269 aaPredicted RBP12.81□□□□□ -0.36
TRAF1-201ENST00000373887 CEACAM16Q2WEN9 425 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 TUSC5Q8IXB3 177 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 OR4F17Q8NGA8 305 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 SMCHD1A6NHR9 2005 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 SPINK2P20155 84 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 SULT1A2P50226 295 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 LRRC10Q5BKY1 277 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 MAMSTRQ6ZN01 415 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 ST8SIA1Q92185 356 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 IL22RA2Q969J5 263 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 SMIM19Q96E16 107 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 RNF2Q99496 336 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 PRDM6Q9NQX0 595 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 PMS2P11Q13670 270 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 IL11RAQ14626 422 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 C20orf196Q8IYI0 205 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 NDUFB3O43676 98 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 AVPR2P30518 371 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 PJVKQ0ZLH3 352 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 TTC9Q92623 222 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 DERL3Q96Q80 235 aa12.81□□□□□ -0.36
TRAF1-201ENST00000373887 A0A1B0GUH1 482 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 HTN1P15515 57 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 IQCJQ1A5X6 159 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 C1orf53Q5VUE5 145 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 CD1EP15812 388 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 TIAL1Q01085 375 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRAF1-201ENST00000373887 VMA21Q3ZAQ7 101 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 ACER2Q5QJU3 275 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 KIRREL2Q6UWL6 708 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 LRP11Q86VZ4 500 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 FBXL14Q8N1E6 418 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 ZNF680Q8NEM1 530 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 WASHC3Q9Y3C0 194 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 BCORQ6W2J9 1755 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 FKBP2P26885 142 aaKnown RBP12.8□□□□□ -0.36
TRAF1-201ENST00000373887 SOX8P57073 446 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 LINC00303Q3SY05 128 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 LINC01555Q8NAE3 123 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 FAM26EQ8N5C1 309 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 LILRB1Q8NHL6 650 aaPredicted RBP12.8□□□□□ -0.36
TRAF1-201ENST00000373887 EDARADDQ8WWZ3 215 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 KTI12Q96EK9 354 aaPredicted RBP12.8□□□□□ -0.36
TRAF1-201ENST00000373887 ZAR1LA6NP61 321 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 LIMS3P0CW19 117 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 LIMS4P0CW20 117 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 CEACAM6P40199 344 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 GNG4P50150 75 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 PPOXP50336 477 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 EIF3IQ13347 325 aaKnown RBP12.8□□□□□ -0.36
TRAF1-201ENST00000373887 CDK5R1Q15078 307 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 ZNF628Q5EBL2 1059 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 GGNBP1Q5YKI7 109 aa12.8□□□□□ -0.36
TRAF1-201ENST00000373887 HSD17B10Q99714 261 aaKnown RBP12.8□□□□□ -0.36
TRAF1-201ENST00000373887 FCGR3BO75015 233 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 CSN3P07498 182 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 TPBGQ13641 420 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 ZNF260Q3ZCT1 412 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 SLC35E4Q6ICL7 350 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 BTLAQ7Z6A9 289 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 OR4D9Q8NGE8 314 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 ADAT1Q9BUB4 502 aaKnown RBP12.79□□□□□ -0.36
TRAF1-201ENST00000373887 U3KQ87 197 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 DNPH1O43598 174 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 ATF1P18846 271 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 TRA2AQ13595 282 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRAF1-201ENST00000373887 SSPNQ14714 243 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 RPEL1Q2QD12 228 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 GPBAR1Q8TDU6 330 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 PYCARD-AS1I3L0S3 204 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 MASP2O00187 686 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 ADAM20O43506 726 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 LYZL6O75951 148 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 PEX11BO96011 259 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms