RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 ABHD6Q9BV23 337 aa5.65□□□□□ -1.5
ECHDC1-202ENST00000368289 PTDSS2Q9BVG9 487 aa5.65□□□□□ -1.5
ECHDC1-202ENST00000368289 OR8D2Q9GZM6 311 aa5.65□□□□□ -1.5
ECHDC1-202ENST00000368289 ATG5Q9H1Y0 275 aa5.65□□□□□ -1.5
ECHDC1-202ENST00000368289 EXO5Q9H790 373 aa5.65□□□□□ -1.5
ECHDC1-202ENST00000368289 TMEM138Q9NPI0 162 aa5.65□□□□□ -1.5
ECHDC1-202ENST00000368289 RDH8Q9NYR8 311 aa5.65□□□□□ -1.5
ECHDC1-202ENST00000368289 JKAMPQ9P055 326 aa5.65□□□□□ -1.5
ECHDC1-202ENST00000368289 SHPKQ9UHJ6 478 aa5.65□□□□□ -1.5
ECHDC1-202ENST00000368289 TRAV8-7A0A075B6U6 113 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 A0A0B4J203 849 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 TMEM272A0A1B0GTI8 110 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 PRR32B1ATL7 298 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 IDSB3KWA1 339 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 ZNF736B4DX44 427 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 NPIPA5E9PKD4 350 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 TEX46H3BTG2 121 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 I3L521 148 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 DCTN6O00399 190 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 ALOX12BO75342 701 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 CA11O75493 328 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 SRSF10O75494 262 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 CDC123O75794 336 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 KLF7O75840 302 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 SCAF4O95104 1147 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 MPC2O95563 127 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 ITGA5P08648 1049 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 SPARCP09486 303 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 OR4E1P0C645 316 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 PTNP21246 168 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 BDKRB2P30411 391 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 GRPRP30550 384 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 APOBEC3AP31941 199 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 EIF1P41567 113 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 EIF5AP63241 154 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 EIF2B1Q14232 305 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 HLXQ14774 488 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 RGS7BPQ6MZT1 257 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 RHBDD2Q6NTF9 364 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 UQCC3Q6UW78 93 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 GSG1LQ6UXU4 331 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 Q6ZTK2 550 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 NDUFAF7Q7L592 441 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 OVCH2Q7RTZ1 564 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 LYPD6Q86Y78 171 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 ZNF584Q8IVC4 421 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 C9orf40Q8IXQ3 194 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 IZUMO1Q8IYV9 350 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 BEST4Q8NFU0 473 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 SLC26A10Q8NG04 563 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 OR51D1Q8NGF3 324 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 OR5M9Q8NGP3 310 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 DOK4Q8TEW6 326 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 RNF133Q8WVZ7 376 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 ASB10Q8WXI3 467 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 AQP3Q92482 292 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 SEH1LQ96EE3 360 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 ELMOD3Q96FG2 381 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 SLC25A44Q96H78 314 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.64□□□□□ -1.515e-12■■■■■ 43.9
ECHDC1-202ENST00000368289 MRPL22Q9NWU5 206 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 ALKBH4Q9NXW9 302 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 KLHL13Q9P2N7 655 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 C19orf25Q9UFG5 118 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 OR52A1Q9UKL2 312 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 ZDHHC8Q9ULC8 765 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 NPIPA1Q9UND3 350 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 KLHDC2Q9Y2U9 406 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 LRP12Q9Y561 859 aa5.64□□□□□ -1.51
ECHDC1-202ENST00000368289 FREM3P0C091 2139 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 A0A087WZY1 265 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 A0A1B0GTI1 187 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 TMEM269A0A1B0GVZ9 245 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 KANTRA0A1W2PQU2 76 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 GAGE12BA1L429 117 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 GAGE12HA6NDE8 117 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 MFSD2BA6NFX1 497 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 TVP23AA6NH52 213 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 CEACAM18A8MTB9 384 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 A8MXK9 166 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 F2RL2O00254 374 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 TUSC2O75896 110 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 RLN1P04808 185 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 H2BFMP0C1H6 154 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 ANXA7P20073 488 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 RAB3AP20336 220 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 GCSHP23434 173 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 NUP62P37198 522 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 CX3CR1P49238 355 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 CLDN12P56749 244 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 GRB2P62993 217 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 NKX6-1P78426 367 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 NAAAQ02083 359 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 SNTB1Q13884 538 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 NNATQ16517 81 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 RNASE10Q5GAN6 216 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 GLYATL3Q5SZD4 288 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 C11orf88Q6PI97 169 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 SLC35D2Q76EJ3 337 aa5.63□□□□□ -1.51
ECHDC1-202ENST00000368289 MARCH3Q86UD3 253 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms