RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 NPIPA5E9PKD4 350 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 RNASEK-C17orf49H0YIS7 233 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 ETV2O00321 342 aaPredicted RBP10.1□□□□□ -0.79
USF1-201ENST00000368019 P2RY10O00398 339 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 SYT7O43581 403 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 CRYBA1P05813 215 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 FCGR3AP08637 254 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 AKR1C4P17516 323 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 ZNF93P35789 620 aaPredicted RBP10.1□□□□□ -0.79
USF1-201ENST00000368019 APOBEC1P41238 236 aaKnown RBP10.1□□□□□ -0.79
USF1-201ENST00000368019 RPL35P42766 123 aaKnown RBP10.1□□□□□ -0.79
USF1-201ENST00000368019 NPBWR1P48145 328 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 AKR1D1P51857 326 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 DVL1P1P54792 670 aaPredicted RBP10.1□□□□□ -0.79
USF1-201ENST00000368019 EMP2P54851 167 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 FAM3AP98173 230 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 PLCXD2Q0VAA5 305 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 GFOD2Q3B7J2 385 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 C1QL3Q5VWW1 255 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 OR10K2Q6IF99 312 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 H1FNTQ75WM6 255 aaPredicted RBP10.1□□□□□ -0.79
USF1-201ENST00000368019 COX15Q7KZN9 410 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 SLC29A4Q7RTT9 530 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 TMEM200AQ86VY9 491 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 ANGPTL5Q86XS5 388 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 FAM89BQ8N5H3 189 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 ST6GALNAC3Q8NDV1 305 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 OR10H5Q8NGA6 315 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 OR52N4Q8NGI2 321 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 OR5H2Q8NGV7 314 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 MARCH1Q8TCQ1 289 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 TMED6Q8WW62 240 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 SLC25A36Q96CQ1 311 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 RRNAD1Q96FB5 475 aaKnown RBP10.1□□□□□ -0.79
USF1-201ENST00000368019 SPSB2Q99619 263 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 MICU1Q9BPX6 476 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 WDR77Q9BQA1 342 aaPredicted RBP10.1□□□□□ -0.79
USF1-201ENST00000368019 PBOV1Q9GZY1 135 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 WDR54Q9H977 334 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 CHST11Q9NPF2 352 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 NPIPA1Q9UND3 350 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 TIMM10BQ9Y5J6 103 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 HS3ST3B1Q9Y662 390 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 OTOGQ6ZRI0 2925 aa10.1□□□□□ -0.79
USF1-201ENST00000368019 PDZD2O15018 2839 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 DCHS2Q6V1P9 2916 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 EXPH5Q8NEV8 1989 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 A0A1B0GX78 115 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 MEX3AA1L020 520 aaKnown RBP10.09□□□□□ -0.79
USF1-201ENST00000368019 VSTM2BA6NLU5 285 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 COLCA2A8K830 154 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 MS4A18H0YCH9 400 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 UBE2CO00762 179 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 JTBO76095 146 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 CSN2P05814 226 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 SPP1P10451 314 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 PRF1P14222 555 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 MUC1P15941 1255 aaPredicted RBP10.09□□□□□ -0.79
USF1-201ENST00000368019 PTAFRP25105 342 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 SUCLG1P53597 346 aaKnown RBP10.09□□□□□ -0.79
USF1-201ENST00000368019 ECH1Q13011 328 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 KCNMB1Q16558 191 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 MS4A18Q3C1V0 323 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 OR52W1Q6IF63 320 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 TMEM88Q6PEY1 159 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 TTLL10Q6ZVT0 673 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 CBLN2Q8IUK8 224 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 GVQW1Q8N7I0 195 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 RXFP4Q8TDU9 374 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 FGGYQ96C11 551 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 SLAMF6Q96DU3 332 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 RAB3CQ96E17 227 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 C1orf147Q96MC9 270 aaPredicted RBP10.09□□□□□ -0.79
USF1-201ENST00000368019 WWTR1Q9GZV5 400 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 ARV1Q9H2C2 271 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 SMDT1Q9H4I9 107 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 ZMAT3Q9HA38 289 aaKnown RBP10.09□□□□□ -0.79
USF1-201ENST00000368019 PLEKHA2Q9HB19 425 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 PNO1Q9NRX1 252 aaKnown RBP10.09□□□□□ -0.79
USF1-201ENST00000368019 CUTCQ9NTM9 273 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 ALKBH4Q9NXW9 302 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 B3GALT5Q9Y2C3 310 aa10.09□□□□□ -0.79
USF1-201ENST00000368019 FBN2P35556 2912 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 C13orf42A0A1B0GVH6 325 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 PCP4L1A6NKN8 68 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 FOXI3A8MTJ6 420 aaPredicted RBP10.08□□□□□ -0.8
USF1-201ENST00000368019 C1orf196B1AJZ1 125 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 FAM157AC9JC47 383 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 ZNF878C9JN71 531 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 H3BSH0 61 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 ADAM10O14672 748 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 SIGLEC5O15389 551 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 CDC14BO60729 498 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 NUDT14O95848 222 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 ATXN8OSP0DMR3 200 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 RPS2P15880 293 aaKnown RBP10.08□□□□□ -0.8
USF1-201ENST00000368019 GNB3P16520 340 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 ZNF20P17024 532 aa10.08□□□□□ -0.8
USF1-201ENST00000368019 ITGA3P26006 1051 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms