RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 UBE2E1P51965 193 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 RAG2P55895 527 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ISL1P61371 349 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ERVK11-1P61568 191 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 GUCA2AQ02747 115 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 PRB3Q04118 309 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 BCL2L15Q5TBC7 163 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 COMMD2Q86X83 199 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 CATSPERDQ86XM0 798 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 C11orf42Q8N5U0 333 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 CD177Q8N6Q3 437 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 OR2T27Q8NH04 317 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 WFDC12Q8WWY7 111 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 H1FXQ92522 213 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 NRIP2Q9BQI9 281 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 BEX1Q9HBH7 125 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ZNRD1Q9P1U0 126 aa11.19□□□□□ -0.62
TNFRSF1A-202ENST00000366159 TRBV23-1A0A0A0MS06 115 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 J3QT63 122 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 NPFFO15130 113 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 NDUFB7P17568 137 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 HAAOP46952 286 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 GABRA2P47869 451 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 KLRD1Q13241 179 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 TMED1Q13445 227 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 TAF9Q16594 264 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 OLFML2AQ68BL7 652 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ZNF573Q86YE8 665 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 OR8J1Q8NGP2 316 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 OR4F5Q8NH21 305 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 RORBQ92753 470 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 EME1Q96AY2 570 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 AJUBAQ96IF1 538 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ZNF488Q96MN9 340 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 METTL8Q9H825 291 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ELL3Q9HB65 397 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 GPR173Q9NS66 373 aa11.18□□□□□ -0.62
TNFRSF1A-202ENST00000366159 CLPSL1A2RUU4 121 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 A6NIN4 97 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 METTL15A6NJ78 407 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 RFPL4AA6NLU0 287 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 RFPL4AL1F8VTS6 287 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 GPR137BO60478 399 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 SULT1C4O75897 302 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 KRT8P05787 483 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 PRDX2P32119 198 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 KRTAP10-3P60369 221 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 SRSF4Q08170 494 aaKnown RBP11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ACSM1Q08AH1 577 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 SLC25A30Q5SVS4 291 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 CALHM1Q8IU99 346 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ZNF561Q8N587 486 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ZSCAN4Q8NAM6 433 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 LINC01006Q8NI28 216 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 TBX5Q99593 518 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 CITED1Q99966 193 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 DPAGT1Q9H3H5 408 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 GTF2A1LQ9UNN4 478 aa11.17□□□□□ -0.62
TNFRSF1A-202ENST00000366159 H3BNX3 289 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 J3QRE1 110 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 RPP14O95059 124 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 APOL3O95236 402 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 KNG1P01042 644 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ALPLP05186 524 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 CRYBA1P05813 215 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 FBP1P09467 338 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 SAA4P35542 130 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ZNF85Q03923 595 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 IL24Q13007 206 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 UBE2V2Q15819 145 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 OCLNQ16625 522 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 SMIM21Q3B7S5 101 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 NCR3LG1Q68D85 454 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 PRSS35Q8N3Z0 413 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 PNKDQ8N490 385 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 YIPF7Q8N8F6 280 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 TRUB1Q8WWH5 349 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 UBE2FQ969M7 185 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 RBM4BQ9BQ04 359 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 PKIBQ9C010 78 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 RIBC2Q9H4K1 309 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 C19orf12Q9NSK7 152 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 CAB39Q9Y376 341 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 FAM96BQ9Y3D0 163 aa11.16□□□□□ -0.62
TNFRSF1A-202ENST00000366159 IGKV1-27A0A075B6S5 117 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 A0A1W2PQ09 198 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ANKRD61A6NGH8 418 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 CLPXO76031 633 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 EEF1B2P24534 225 aaKnown RBP11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 PROK1P58294 105 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 TMEM200BQ69YZ2 307 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 GDPGP1Q6ZNW5 385 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 ANGPTL5Q86XS5 388 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 CCDC54Q8NEL0 328 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 TMEM185AQ8NFB2 350 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 OR5D13Q8NGL4 314 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 PYDC1Q8WXC3 89 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 HRASLS5Q96KN8 279 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 C16orf95Q9H693 158 aa11.15□□□□□ -0.62
TNFRSF1A-202ENST00000366159 USE1Q9NZ43 259 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms