RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 IGHV2-5P01817 119 aa20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 ALDOBP05062 364 aa20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 IGFBP3P17936 291 aaPredicted RBP20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 FSTP19883 344 aa20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 PSMA1P25786 263 aaKnown RBP20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 IL2RGP31785 369 aa20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 GZMKP49863 264 aa20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 ACSM3Q53FZ2 586 aa20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 ARMCX4Q5H9R4 360 aa20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 SFRP4Q6FHJ7 346 aaPredicted RBP20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 DERL3Q96Q80 235 aa20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 TMEM246Q9BRR3 403 aa20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 TMED9Q9BVK6 235 aa20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 ZNF665Q9H7R5 613 aa20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 PATZ1Q9HBE1 687 aaKnown RBP20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 RASL12Q9NYN1 266 aa20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 CKLFQ9UBR5 152 aa20.34■□□□□ 0.85
ALKAL1-201ENST00000358543 C3orf80F5H4A9 247 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 TNFRSF13BO14836 293 aaPredicted RBP20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 AKR7A2O43488 359 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 SYNGR1O43759 233 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 PGA5P0DJD9 388 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 CD80P33681 288 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 TGFBR2P37173 567 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 PPP3R1P63098 170 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 HOXA4Q00056 320 aaPredicted RBP20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 MICBQ29980 383 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 DCDC5Q6ZRR9 648 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 POC1AQ8NBT0 407 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 DEFB108BQ8NET1 73 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 ZNF696Q9H7X3 374 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 MIOXQ9UGB7 285 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 PCDHB10Q9UN67 800 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 FOXJ3Q9UPW0 622 aa20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 SF3B6Q9Y3B4 125 aaKnown RBP20.33■□□□□ 0.85
ALKAL1-201ENST00000358543 CEACAM18A8MTB9 384 aa20.32■□□□□ 0.84
ALKAL1-201ENST00000358543 MAGEB3O15480 346 aa20.32■□□□□ 0.84
ALKAL1-201ENST00000358543 HCKP08631 526 aa20.32■□□□□ 0.84
ALKAL1-201ENST00000358543 IGHV4-31P0DP07 118 aa20.32■□□□□ 0.84
ALKAL1-201ENST00000358543 GLRA1P23415 457 aa20.32■□□□□ 0.84
ALKAL1-201ENST00000358543 C19orf18Q8NEA5 215 aa20.32■□□□□ 0.84
ALKAL1-201ENST00000358543 OR51A2Q8NGJ7 313 aa20.32■□□□□ 0.84
ALKAL1-201ENST00000358543 CPNE2Q96FN4 548 aaPredicted RBP20.32■□□□□ 0.84
ALKAL1-201ENST00000358543 TMEM138Q9NPI0 162 aa20.32■□□□□ 0.84
ALKAL1-201ENST00000358543 ZANQ9Y493 2812 aa20.32■□□□□ 0.84
ALKAL1-201ENST00000358543 A0A087WXM4 84 aa20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 F5H0A9 414 aaPredicted RBP20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 PIN1P1O15428 100 aa20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 WNT2P09544 360 aa20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 GABRA5P31644 462 aa20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 PDZK1IP1Q13113 114 aa20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 KISS1Q15726 138 aa20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 CYB5R2Q6BCY4 276 aa20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 CRIP3Q6Q6R5 217 aa20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 FAM90A1Q86YD7 464 aa20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 MKXQ8IYA7 352 aa20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 PHYHIPQ92561 330 aa20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 NR1H4Q96RI1 486 aaPredicted RBP20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 NRIP2Q9BQI9 281 aa20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 WDR13Q9H1Z4 485 aa20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 NOX4Q9NPH5 578 aa20.31■□□□□ 0.84
ALKAL1-201ENST00000358543 A0A1W2PPK0 400 aa20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 BDKRB2P30411 391 aa20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 ERVK11-1P61568 191 aa20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 RPS25P62851 125 aaKnown RBP20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 KRTAP1-1Q07627 177 aa20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 SSX1Q16384 188 aa20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 SLC25A26Q70HW3 274 aa20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 TSPAN14Q8NG11 270 aa20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 TMEM203Q969S6 136 aa20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 TMIGD2Q96BF3 282 aa20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 ORAI1Q96D31 301 aa20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 HES4Q9HCC6 221 aa20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 NDUFB11Q9NX14 153 aa20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 MTCH1Q9NZJ7 389 aa20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.3■□□□□ 0.84
ALKAL1-201ENST00000358543 B4DSR2 109 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 CD5LO43866 347 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 INMTO95050 263 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 CYB5AP00167 134 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 INSL4Q14641 139 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 SYT6Q5T7P8 510 aaPredicted RBP20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 ATPAF1Q5TC12 328 aaPredicted RBP20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 CEACAM19Q7Z692 300 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 SAXO1Q8IYX7 474 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 LINC01356Q8N9X3 169 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 ZSCAN4Q8NAM6 433 aaPredicted RBP20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 OR52N4Q8NGI2 321 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 MSI2Q96DH6 328 aaKnown RBP20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 SPACA5Q96QH8 159 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 SMR3AQ99954 134 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 DNTTIP1Q9H147 329 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 NLKQ9UBE8 527 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 KAAG1Q9UBP8 84 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 DNAJB11Q9UBS4 358 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 TLN2Q9Y4G6 2542 aa20.29■□□□□ 0.84
ALKAL1-201ENST00000358543 TRAV8-7A0A075B6U6 113 aa20.28■□□□□ 0.84
ALKAL1-201ENST00000358543 IGHV3OR15-7A0A075B7D8 119 aa20.28■□□□□ 0.84
ALKAL1-201ENST00000358543 FAM157AC9JC47 383 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms