RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 IFT81Q8WYA0 676 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CMTM5Q96DZ9 223 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 C1orf147Q96MC9 270 aaPredicted RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ACOT13Q9NPJ3 140 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 DDX19AQ9NUU7 478 aaKnown RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 TAS2R13Q9NYV9 303 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 VAX2Q9UIW0 290 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 NEUROG3Q9Y4Z2 214 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 AKAP11Q9UKA4 1901 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 HECTD1Q9ULT8 2610 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 C2orf16Q68DN1 1984 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ARHGAP5Q13017 1502 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CREBBPQ92793 2442 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 NCOR1O75376 2440 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 RAD51BO15315 384 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 SGCEO43556 437 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 IGLV2-23P01705 113 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 APOEP02649 317 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CD74P04233 296 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 KRT7P08729 469 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 TACSTD2P09758 323 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 COILP38432 576 aaPredicted RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 PPP1CBP62140 327 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF45Q02386 682 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CAPRIN1Q14444 709 aaKnown RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ZNHIT3Q15649 155 aaPredicted RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 PRR30Q53SZ7 412 aaPredicted RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 C5orf47Q569G3 176 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 LRRC10Q5BKY1 277 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ATAD3CQ5T2N8 411 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CPTPQ5TA50 214 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 METTL21CQ5VZV1 264 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 DNM1P46Q6ZS02 220 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 TNFRSF14Q92956 283 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 FLYWCH2Q96CP2 140 aaKnown RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ZMYND19Q96E35 227 aaPredicted RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 WDR34Q96EX3 536 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 AURKBQ96GD4 344 aaPredicted RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 PPP1R36Q96LQ0 422 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 TRIM15Q9C019 465 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 YIPF3Q9GZM5 350 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 SYT4Q9H2B2 425 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 DIABLOQ9NR28 239 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 SDHAF2Q9NX18 166 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 GLS2Q9UI32 602 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CES1P1Q9UKY3 287 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CLIP1P30622 1438 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 AKAP12Q02952 1782 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 IGKV1-27A0A075B6S5 117 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ISPDA4D126 451 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 C5orf63A6NC05 138 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ZSWIM8A7E2V4 1837 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 SYCE1LA8MT33 242 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ANGPTL7O43827 346 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 MPZL2O60487 215 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ROCK2O75116 1388 aaKnown RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ALOX12BO75342 701 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 E2F6O75461 281 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 MYCBP2O75592 4640 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 SERPINB7O75635 380 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 VAMP5O95183 116 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 SNAPINO95295 136 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ABCB11O95342 1321 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 KLF8O95600 359 aaPredicted RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 TRIM49P0CI25 452 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 TRIM49CP0CI26 452 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ITGB4P16144 1822 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 BGNP21810 368 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 PAX6P26367 422 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 PHBP35232 272 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 CDKN2BP42772 138 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 CCR6P51684 374 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 XKP51811 444 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 RWDD2BP57060 319 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 DAZ2Q13117 558 aaKnown RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 RAB31Q13636 194 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 NSDHLQ15738 373 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 POU2AF1Q16633 256 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 CCDC122Q5T0U0 273 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 MARC1Q5VT66 337 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ADAM5Q6NVV9 412 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 NPSR1Q6W5P4 371 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF493Q6ZR52 646 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 PAGE2Q7Z2X7 111 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 CROCCP2Q86T23 111 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 OAFQ86UD1 273 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 SLC30A8Q8IWU4 369 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 TAF1LQ8IZX4 1826 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 BEST4Q8NFU0 473 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 MRAPQ8TCY5 172 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 TMEM234Q8WY98 164 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 GHSRQ92847 366 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 CCDC124Q96CT7 223 aaKnown RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 WFIKKN1Q96NZ8 548 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 HDHD3Q9BSH5 251 aaPredicted RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 PAXXQ9BUH6 204 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 ANGPTL4Q9BY76 406 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 YTHDF1Q9BYJ9 559 aaKnown RBP1.16□□□□□ -2.22
BRCA1-202ENST00000354071 SRRQ9GZT4 340 aa1.16□□□□□ -2.22
BRCA1-202ENST00000354071 DRC3Q9H069 523 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms