RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 ZNF485Q8NCK3 441 aa18.34■□□□□ 0.53
SNX3-202ENST00000349379 CCL13Q99616 98 aa18.34■□□□□ 0.53
SNX3-202ENST00000349379 SNTG1Q9NSN8 517 aa18.34■□□□□ 0.53
SNX3-202ENST00000349379 FKBP14Q9NWM8 211 aa18.34■□□□□ 0.53
SNX3-202ENST00000349379 NLKQ9UBE8 527 aa18.34■□□□□ 0.53
SNX3-202ENST00000349379 DNAJB11Q9UBS4 358 aa18.34■□□□□ 0.53
SNX3-202ENST00000349379 DUX4Q9UBX2 424 aa18.34■□□□□ 0.53
SNX3-202ENST00000349379 CLEC2DQ9UHP7 191 aa18.34■□□□□ 0.53
SNX3-202ENST00000349379 PSORS1C1Q9UIG5 152 aa18.34■□□□□ 0.53
SNX3-202ENST00000349379 SLC7A11Q9UPY5 501 aa18.34■□□□□ 0.53
SNX3-202ENST00000349379 POLDIP2Q9Y2S7 368 aa18.34■□□□□ 0.53
SNX3-202ENST00000349379 IGKV1-9A0A0C4DH69 117 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 EFCAB10A6NFE3 127 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 H0YHG0 523 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 DVL1O14640 695 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 SERPINA3P01011 423 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 PPIAL4GP0DN37 164 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 ADRA2CP18825 462 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 MYL12AP19105 171 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 FUT6P51993 359 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 GTF2A1P52655 376 aaPredicted RBP18.33■□□□□ 0.52
SNX3-202ENST00000349379 GMFBP60983 142 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 ST3GAL4Q11206 333 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 RIPK1Q13546 671 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 CDK5R1Q15078 307 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 CNN3Q15417 329 aaKnown RBP18.33■□□□□ 0.52
SNX3-202ENST00000349379 CCDC58Q4VC31 144 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 XAF1Q6GPH4 301 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 BTNL3Q6UXE8 466 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 TMPRSS11AQ6ZMR5 421 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 DNAAF1Q8NEP3 725 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 OR5T2Q8NGG2 359 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 OR52N1Q8NH53 320 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 TRMT10AQ8TBZ6 339 aaKnown RBP18.33■□□□□ 0.52
SNX3-202ENST00000349379 TMIGD2Q96BF3 282 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 FGGYQ96C11 551 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 PDCD1LG2Q9BQ51 273 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 NRIP2Q9BQI9 281 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 NUDT16L1Q9BRJ7 211 aaKnown RBP18.33■□□□□ 0.52
SNX3-202ENST00000349379 RASSF4Q9H2L5 321 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 RASL12Q9NYN1 266 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 METRNQ9UJH8 293 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 ZNF222Q9UK12 451 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 AUP1Q9Y679 476 aa18.33■□□□□ 0.52
SNX3-202ENST00000349379 OR2AT4A6NND4 320 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 ERVK11-1P61568 191 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 IL24Q13007 206 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 CD276Q5ZPR3 534 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 RPL22L1Q6P5R6 122 aaKnown RBP18.32■□□□□ 0.52
SNX3-202ENST00000349379 ACP7Q6ZNF0 438 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 FAM216BQ8N7L0 139 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 OR13C3Q8NGS6 347 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 OR5AK2Q8NH90 309 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 NANPQ8TBE9 248 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 NPRL2Q8WTW4 380 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 GAFA1Q96PS6 74 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 MRI1Q9BV20 369 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 COMMD4Q9H0A8 199 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 HES4Q9HCC6 221 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 DSCAML1Q8TD84 2053 aa18.32■□□□□ 0.52
SNX3-202ENST00000349379 IGKV1D-17A0A075B6S4 117 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 TRBV2A0A0J9YWF9 115 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 FAM230AA0A1W2PPH8 454 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 OGG1O15527 345 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 ENSAO43768 121 aaKnown RBP18.31■□□□□ 0.52
SNX3-202ENST00000349379 LALBAP00709 142 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 PSG2P11465 335 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 ZNF20P17024 532 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 ATF1P18846 271 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 MED21Q13503 144 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 ANGPTL5Q86XS5 388 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 FGFRL1Q8N441 504 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 RGP1Q92546 391 aaPredicted RBP18.31■□□□□ 0.52
SNX3-202ENST00000349379 BORCS8Q96FH0 119 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 ZNF488Q96MN9 340 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 VCX3BQ9H321 246 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 BABAM2Q9NXR7 383 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 ATRQ13535 2644 aa18.31■□□□□ 0.52
SNX3-202ENST00000349379 SIGLEC5O15389 551 aa18.3■□□□□ 0.52
SNX3-202ENST00000349379 ECDO95905 644 aaPredicted RBP18.3■□□□□ 0.52
SNX3-202ENST00000349379 MT-ND2P03891 347 aa18.3■□□□□ 0.52
SNX3-202ENST00000349379 AZGP1P25311 298 aaKnown RBP18.3■□□□□ 0.52
SNX3-202ENST00000349379 TUSC1Q2TAM9 212 aa18.3■□□□□ 0.52
SNX3-202ENST00000349379 SMIM21Q3B7S5 101 aa18.3■□□□□ 0.52
SNX3-202ENST00000349379 KLF17Q5JT82 389 aaPredicted RBP18.3■□□□□ 0.52
SNX3-202ENST00000349379 AHSA2Q719I0 299 aa18.3■□□□□ 0.52
SNX3-202ENST00000349379 PARP16Q8N5Y8 322 aa18.3■□□□□ 0.52
SNX3-202ENST00000349379 BPIFB6Q8NFQ5 453 aa18.3■□□□□ 0.52
SNX3-202ENST00000349379 SPSB1Q96BD6 273 aa18.3■□□□□ 0.52
SNX3-202ENST00000349379 UPRTQ96BW1 309 aa18.3■□□□□ 0.52
SNX3-202ENST00000349379 SIRT4Q9Y6E7 314 aaPredicted RBP18.3■□□□□ 0.52
SNX3-202ENST00000349379 NKX6-3A6NJ46 265 aa18.29■□□□□ 0.52
SNX3-202ENST00000349379 GPR37O15354 613 aa18.29■□□□□ 0.52
SNX3-202ENST00000349379 ALX3O95076 343 aa18.29■□□□□ 0.52
SNX3-202ENST00000349379 TFF1P04155 84 aa18.29■□□□□ 0.52
SNX3-202ENST00000349379 LIPFP07098 398 aa18.29■□□□□ 0.52
SNX3-202ENST00000349379 SELLP14151 372 aa18.29■□□□□ 0.52
SNX3-202ENST00000349379 EPHA1P21709 976 aa18.29■□□□□ 0.52
SNX3-202ENST00000349379 PRKACBP22694 351 aa18.29■□□□□ 0.52
SNX3-202ENST00000349379 MYF6P23409 242 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms