RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 EDARADDQ8WWZ3 215 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 C1QTNF2Q9BXJ5 285 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 UBE2L5PA0A1B0GUS4 154 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CPSF4LA6NMK7 179 aaKnown RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 C3orf80F5H4A9 247 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 LRP3O75074 770 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ZIC2O95409 532 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 APCSP02743 223 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CCL2P13500 99 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 WNT3AP56704 352 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 GLB1LQ6UWU2 654 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CBLL1Q75N03 491 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 MUC15Q8N387 334 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SLC22A24Q8N4F4 322 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 PTPMT1Q8WUK0 201 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 LHX4Q969G2 390 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SPTSSAQ969W0 71 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ADTRPQ96IZ2 230 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 AMBRA1Q9C0C7 1298 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SLC38A8A6NNN8 435 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 H2BFMP0C1H6 154 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 OR9G9P0C7N8 305 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 IFITM1P13164 125 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SLC16A11Q8NCK7 471 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ADAT3Q96EY9 351 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 RHOVQ96L33 236 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 TBX15Q96SF7 602 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 FAM173AQ9BQD7 235 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 MAGEH1Q9H213 219 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 PARLQ9H300 379 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 KLRF1Q9NZS2 232 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 A0A1W2PRS3 328 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 NPIPB7O75200 414 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 FAM87AP0C7U9 286 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 IRF1P10914 325 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM33P57088 247 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 OR1D5P58170 312 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 LRRC10Q5BKY1 277 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM101Q96IK0 257 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 C16orf70Q9BSU1 422 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 HCAR1Q9BXC0 346 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 PRSS21Q9Y6M0 314 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ACACAQ13085 2346 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CLTCQ00610 1675 aaKnown RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 KIR2DS1A0A191URI9 304 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CXorf51AA0A1B0GTR3 108 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 HEPACAM2A8MVW5 462 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 J3KT08 172 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SNRPBP14678 240 aaKnown RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CRYBB2P43320 205 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 KIR2DS4P43632 304 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 GLIPR1P48060 266 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 KIR2DS1Q14954 304 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 TRAPPC6BQ86SZ2 158 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SLC25A33Q9BSK2 321 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 IL21Q9HBE4 155 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CSAG2Q9Y5P2 127 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 A0A1W2PRF3 423 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 A0A1W2PRM7 423 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 C1QTNF9BB2RNN3 333 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ARG1P05089 322 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 GPX7Q96SL4 187 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ANKRD20A5PA0PJZ0 165 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 BMPR1BO00238 502 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 WIPF1O43516 503 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 AGXTP21549 392 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 FCER1GP30273 86 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CNN1P51911 297 aaKnown RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 C5orf47Q569G3 176 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ABHD4Q8TB40 342 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 RPS4Y2Q8TD47 263 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 P2RY11Q96G91 374 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 RAMP1O60894 148 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 THBDP07204 575 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 BCL3P20749 454 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SUOXP51687 545 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 OLIG2Q13516 323 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 LBX2Q6XYB7 198 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CALHM3Q86XJ0 350 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 OR1P1Q8NH06 330 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 OR5P2Q8WZ92 322 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 JSRP1Q96MG2 331 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SSBP3Q9BWW4 388 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 COA1Q9GZY4 146 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 C2orf42Q9NWW7 574 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 YIPF1Q9Y548 306 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SSR2P43308 183 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 TESK1Q15569 626 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 PHYKPLQ8IUZ5 450 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CBLN4Q9NTU7 201 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 PIK3C2AO00443 1686 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 GCM2O75603 506 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CA7P43166 264 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 COX18Q8N8Q8 333 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 PIK3IP1Q96FE7 263 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 PCED1BQ96HM7 432 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 OR2T8A6NH00 312 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SCDO00767 359 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 RUNX1Q01196 453 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms