RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 LINC01553A4QN01 128 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 CXCL10P02778 98 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 CTSDP07339 412 aaPredicted RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 TMIGD3P0DMS9 266 aaPredicted RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ST6GAL1P15907 406 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 DYNLT3P51808 116 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 POLR2GP62487 172 aaKnown RBP eCLIP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 KHDC3LQ587J8 217 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF573Q86YE8 665 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 TAAR9Q96RI9 348 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 FBXO34Q9NWN3 711 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 SCN10AQ9Y5Y9 1956 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 TRBV5-5A0A0J9YX44 114 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 GALNSP34059 522 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 FOLR3P41439 243 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 SMIM15Q7Z3B0 74 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ATG4DQ86TL0 474 aaPredicted RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 HOGA1Q86XE5 327 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 KDF1Q8NAX2 398 aaPredicted RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 HLA-CQ95604 372 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 CLDN23Q96B33 292 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ELSPBP1Q96BH3 223 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 NPTNQ9Y639 398 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 KCNMB2Q9Y691 235 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 PIAS3Q9Y6X2 628 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 C2orf72A6NCS6 295 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 FSTP19883 344 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 BTCP35070 178 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 CDX1P47902 265 aaPredicted RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 NKAIN2Q5VXU1 208 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 C6orf201Q7Z4U5 140 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 H1FOOQ8IZA3 346 aaPredicted RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 OR13H1Q8NG92 308 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ERGIC1Q969X5 290 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 VSTM2LQ96N03 204 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 UTP23Q9BRU9 249 aaKnown RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 C6orf106Q9H6K1 298 aaPredicted RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 MED29Q9NX70 200 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 A0A1W2PQD3 144 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 FAM166BA8MTA8 275 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 CYB5R3P00387 301 aaPredicted RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 CYC1P08574 325 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 MYOFQ9NZM1 2061 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 NPBWR1P48145 328 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF117Q03924 483 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 LIAT1Q6ZQX7 453 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 SLC35E3Q7Z769 313 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 OR6C1Q96RD1 312 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 CDH20Q9HBT6 801 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 Q9N2K0 584 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 VAX2Q9UIW0 290 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ANXA10Q9UJ72 324 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 SLCO1B1Q9Y6L6 691 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ZGLP1P0C6A0 271 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 RPS15P62841 145 aaKnown RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 OR8B8Q15620 311 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 SLC26A10Q8NG04 563 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ASB10Q8WXI3 467 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 AQP3Q92482 292 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 MAP1LC3B2A6NCE7 125 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ANGPTL7O43827 346 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF737O75373 536 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ZBTB25P24278 435 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 CCR2P41597 374 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 MICBQ29980 383 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 CST9Q5W186 159 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 OR51H1Q8NH63 302 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 C11orf40Q8WZ69 217 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 MAP1LC3BQ9GZQ8 125 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 YBX2Q9Y2T7 364 aaKnown RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 PDE6DO43924 150 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 CST7O76096 145 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 OPN1LWP04000 364 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 OR2B11Q5JQS5 317 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 TEX30Q5JUR7 227 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 OR10C1Q96KK4 312 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 GPX7Q96SL4 187 aaPredicted RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 MRPS18BQ9Y676 258 aaKnown RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 A0A1W2PPC1 479 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 CLEC18AA5D8T8 446 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 NPIPB9F8W1W9 429 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 J3QRE1 110 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ACTL6BO94805 426 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 MMP16P51512 607 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 EFNB2P52799 333 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 EFNB1P98172 346 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 NR0B2Q15466 257 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ABHD17BQ5VST6 288 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 CLEC18CQ8NCF0 446 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 TUBA4BQ9H853 241 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ZDHHC11Q9H8X9 412 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ZMIZ1Q9ULJ6 1067 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF816-ZNF321PA0A0X1KG74 233 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 PITX3O75364 302 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 YIF1AO95070 293 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 RPS4Y1P22090 263 aaKnown RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 SSR4P51571 173 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 SP6Q3SY56 376 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF813Q6ZN06 617 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 TSEN54Q7Z6J9 526 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms