RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 PRDX4Q13162 271 aa12.96□□□□□ -0.33
RET-201ENST00000340058 COL19A1Q14993 1142 aa12.96□□□□□ -0.33
RET-201ENST00000340058 ACOT7LQ6ZUV0 252 aa12.96□□□□□ -0.33
RET-201ENST00000340058 SUMF2Q8NBJ7 301 aa12.96□□□□□ -0.33
RET-201ENST00000340058 TMEM104Q8NE00 496 aa12.96□□□□□ -0.33
RET-201ENST00000340058 SCARB1Q8WTV0 552 aa12.96□□□□□ -0.33
RET-201ENST00000340058 RNF133Q8WVZ7 376 aa12.96□□□□□ -0.33
RET-201ENST00000340058 ADAM19Q9H013 955 aa12.96□□□□□ -0.33
RET-201ENST00000340058 FAM212BQ9NTI7 297 aaPredicted RBP12.96□□□□□ -0.33
RET-201ENST00000340058 ANKRD20A5PA0PJZ0 165 aa12.96□□□□□ -0.33
RET-201ENST00000340058 DEFB108AA8MXU0 73 aa12.96□□□□□ -0.33
RET-201ENST00000340058 NKX2-8O15522 239 aa12.96□□□□□ -0.33
RET-201ENST00000340058 ATG12O94817 140 aa12.96□□□□□ -0.33
RET-201ENST00000340058 RPS4Y1P22090 263 aaKnown RBP12.96□□□□□ -0.33
RET-201ENST00000340058 FUT6P51993 359 aa12.96□□□□□ -0.33
RET-201ENST00000340058 C19orf57Q0VDD7 668 aa12.96□□□□□ -0.33
RET-201ENST00000340058 MSMO1Q15800 293 aa12.96□□□□□ -0.33
RET-201ENST00000340058 ZNF658BQ4V348 819 aaPredicted RBP12.96□□□□□ -0.33
RET-201ENST00000340058 ARSJQ5FYB0 599 aaPredicted RBP12.96□□□□□ -0.33
RET-201ENST00000340058 CST9LP1Q5W188 147 aa12.96□□□□□ -0.33
RET-201ENST00000340058 RNF141Q8WVD5 230 aa12.96□□□□□ -0.33
RET-201ENST00000340058 LRRC46Q96FV0 321 aa12.96□□□□□ -0.33
RET-201ENST00000340058 MTCL1Q9Y4B5 1905 aaKnown RBP12.96□□□□□ -0.33
RET-201ENST00000340058 KCNAB3O43448 404 aa12.96□□□□□ -0.34
RET-201ENST00000340058 OR13C7P0DN81 318 aa12.96□□□□□ -0.34
RET-201ENST00000340058 SNCAP37840 140 aa12.96□□□□□ -0.34
RET-201ENST00000340058 PDLIM3Q53GG5 364 aaPredicted RBP12.96□□□□□ -0.34
RET-201ENST00000340058 DUSP18Q8NEJ0 188 aa12.96□□□□□ -0.34
RET-201ENST00000340058 OR11H7Q8NGC8 314 aa12.96□□□□□ -0.34
RET-201ENST00000340058 MS4A3Q96HJ5 214 aa12.96□□□□□ -0.34
RET-201ENST00000340058 NTMQ9P121 344 aa12.96□□□□□ -0.34
RET-201ENST00000340058 ATP23Q9Y6H3 246 aa12.96□□□□□ -0.34
RET-201ENST00000340058 RBPJQ06330 500 aa12.95□□□□□ -0.34
RET-201ENST00000340058 LINC01590Q5TEZ4 76 aa12.95□□□□□ -0.34
RET-201ENST00000340058 APCDD1LQ8NCL9 501 aa12.95□□□□□ -0.34
RET-201ENST00000340058 OR10AD1Q8NGE0 317 aa12.95□□□□□ -0.34
RET-201ENST00000340058 FLVCR1-AS1Q8TAF5 88 aa12.95□□□□□ -0.34
RET-201ENST00000340058 PLK3Q9H4B4 646 aa12.95□□□□□ -0.34
RET-201ENST00000340058 PHF3Q92576 2039 aaKnown RBP12.95□□□□□ -0.34
RET-201ENST00000340058 A0A1W2PPV4 95 aa12.95□□□□□ -0.34
RET-201ENST00000340058 MS4A18H0YCH9 400 aa12.95□□□□□ -0.34
RET-201ENST00000340058 RRP8O43159 456 aaKnown RBP12.95□□□□□ -0.34
RET-201ENST00000340058 CEBPEQ15744 281 aa12.95□□□□□ -0.34
RET-201ENST00000340058 MS4A18Q3C1V0 323 aa12.95□□□□□ -0.34
RET-201ENST00000340058 TMEM128Q5BJH2 165 aa12.95□□□□□ -0.34
RET-201ENST00000340058 PXDC1Q5TGL8 231 aa12.95□□□□□ -0.34
RET-201ENST00000340058 CDCP2Q5VXM1 449 aa12.95□□□□□ -0.34
RET-201ENST00000340058 TMEM182Q6ZP80 229 aaPredicted RBP12.95□□□□□ -0.34
RET-201ENST00000340058 OR10V1Q8NGI7 309 aa12.95□□□□□ -0.34
RET-201ENST00000340058 SPACA1Q9HBV2 294 aa12.95□□□□□ -0.34
RET-201ENST00000340058 FAM208BQ5VWN6 2430 aa12.95□□□□□ -0.34
RET-201ENST00000340058 SULT1C2O00338 296 aa12.95□□□□□ -0.34
RET-201ENST00000340058 GEMIN2O14893 280 aaKnown RBP12.95□□□□□ -0.34
RET-201ENST00000340058 SPINT2O43291 252 aa12.95□□□□□ -0.34
RET-201ENST00000340058 RPL12P30050 165 aaKnown RBP12.95□□□□□ -0.34
RET-201ENST00000340058 EIF3IQ13347 325 aaKnown RBP12.95□□□□□ -0.34
RET-201ENST00000340058 MOGAT2Q3SYC2 334 aa12.95□□□□□ -0.34
RET-201ENST00000340058 ARHGEF39Q8N4T4 335 aa12.95□□□□□ -0.34
RET-201ENST00000340058 SLC30A7Q8NEW0 376 aa12.95□□□□□ -0.34
RET-201ENST00000340058 OR2Z1Q8NG97 314 aa12.95□□□□□ -0.34
RET-201ENST00000340058 CHAC2Q8WUX2 184 aa12.95□□□□□ -0.34
RET-201ENST00000340058 KIF25Q9UIL4 384 aa12.95□□□□□ -0.34
RET-201ENST00000340058 POLDIP2Q9Y2S7 368 aa12.95□□□□□ -0.34
RET-201ENST00000340058 URGCP-MRPS24S4R325 110 aa12.95□□□□□ -0.34
RET-201ENST00000340058 ZFP92A6NM28 416 aa12.94□□□□□ -0.34
RET-201ENST00000340058 FIGNL2A6NMB9 653 aa12.94□□□□□ -0.34
RET-201ENST00000340058 SOX15O60248 233 aa12.94□□□□□ -0.34
RET-201ENST00000340058 HLA-DQB1P01920 261 aa12.94□□□□□ -0.34
RET-201ENST00000340058 ADRA2CP18825 462 aa12.94□□□□□ -0.34
RET-201ENST00000340058 CNR1P21554 472 aa12.94□□□□□ -0.34
RET-201ENST00000340058 RAB4BP61018 213 aa12.94□□□□□ -0.34
RET-201ENST00000340058 TOR2AQ5JU69 321 aa12.94□□□□□ -0.34
RET-201ENST00000340058 LPCAT3Q6P1A2 487 aa12.94□□□□□ -0.34
RET-201ENST00000340058 ZFP62Q8NB50 900 aaPredicted RBP12.94□□□□□ -0.34
RET-201ENST00000340058 OR13C8Q8NGS7 320 aa12.94□□□□□ -0.34
RET-201ENST00000340058 OR11L1Q8NGX0 322 aa12.94□□□□□ -0.34
RET-201ENST00000340058 B3GAT1Q9P2W7 334 aa12.94□□□□□ -0.34
RET-201ENST00000340058 SERPINE3A8MV23 424 aa12.94□□□□□ -0.34
RET-201ENST00000340058 AGFG2O95081 481 aa12.94□□□□□ -0.34
RET-201ENST00000340058 KRASP01116 189 aa12.94□□□□□ -0.34
RET-201ENST00000340058 ZNF718Q3SXZ3 478 aa12.94□□□□□ -0.34
RET-201ENST00000340058 TMEM88Q6PEY1 159 aa12.94□□□□□ -0.34
RET-201ENST00000340058 TEX261Q6UWH6 196 aa12.94□□□□□ -0.34
RET-201ENST00000340058 M1APQ8TC57 530 aa12.94□□□□□ -0.34
RET-201ENST00000340058 SPSB1Q96BD6 273 aa12.94□□□□□ -0.34
RET-201ENST00000340058 NPAS1Q99742 590 aa12.94□□□□□ -0.34
RET-201ENST00000340058 DECR2Q9NUI1 292 aa12.94□□□□□ -0.34
RET-201ENST00000340058 PCDHGA9Q9Y5G4 932 aaKnown RBP12.94□□□□□ -0.34
RET-201ENST00000340058 U3KQ87 197 aa12.94□□□□□ -0.34
RET-201ENST00000340058 SIP14410 1827 aa12.94□□□□□ -0.34
RET-201ENST00000340058 IFNA1P01562 189 aa12.94□□□□□ -0.34
RET-201ENST00000340058 MMP16P51512 607 aa12.94□□□□□ -0.34
RET-201ENST00000340058 MLF1P58340 268 aa12.94□□□□□ -0.34
RET-201ENST00000340058 PIGYQ3MUY2 71 aa12.94□□□□□ -0.34
RET-201ENST00000340058 LCN15Q6UWW0 184 aa12.94□□□□□ -0.34
RET-201ENST00000340058 C17orf78Q8N4C9 275 aa12.94□□□□□ -0.34
RET-201ENST00000340058 OR2G3Q8NGZ4 309 aa12.94□□□□□ -0.34
RET-201ENST00000340058 ZNF488Q96MN9 340 aa12.94□□□□□ -0.34
RET-201ENST00000340058 UQCC2Q9BRT2 126 aa12.94□□□□□ -0.34
RET-201ENST00000340058 PLEKHF2Q9H8W4 249 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms