RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 SPNS2Q8IVW8 549 aa10.56□□□□□ -0.72
SHANK2-201ENST00000338508 IL22RA2Q969J5 263 aa10.56□□□□□ -0.72
SHANK2-201ENST00000338508 DERL3Q96Q80 235 aa10.56□□□□□ -0.72
SHANK2-201ENST00000338508 FAAP24Q9BTP7 215 aa10.56□□□□□ -0.72
SHANK2-201ENST00000338508 KLK11Q9UBX7 282 aa10.56□□□□□ -0.72
SHANK2-201ENST00000338508 ARHGEF17Q96PE2 2063 aaPredicted RBP10.56□□□□□ -0.72
SHANK2-201ENST00000338508 OR2A25A4D2G3 310 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 AGFG2O95081 481 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 LPAR6P43657 344 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 LRRC29Q8WV35 223 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 ZNF385DQ9H6B1 395 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 OTOFQ9HC10 1997 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 LOC389332A0A1B0GUA5 103 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 CCKARP32238 428 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 FABP5Q01469 135 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 C16orf47Q6ZP98 133 aaPredicted RBP10.55□□□□□ -0.72
SHANK2-201ENST00000338508 ZBTB44Q8NCP5 570 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 UBTD2Q8WUN7 234 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 ST8SIA1Q92185 356 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 APOBEC3DQ96AK3 386 aaPredicted RBP10.55□□□□□ -0.72
SHANK2-201ENST00000338508 WDR89Q96FK6 387 aaPredicted RBP10.55□□□□□ -0.72
SHANK2-201ENST00000338508 CMC2Q9NRP2 79 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 SLC7A10Q9NS82 523 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 RGPD5Q99666 1765 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 RPS4XP62701 263 aaKnown RBP10.55□□□□□ -0.72
SHANK2-201ENST00000338508 ECSCRQ19T08 205 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 S100A8P05109 93 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 ACP1P24666 158 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 CALCRP30988 508 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 CAPZBP47756 277 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 TCL1AP56279 114 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 MIDNQ504T8 468 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 GPX7Q96SL4 187 aaPredicted RBP10.55□□□□□ -0.72
SHANK2-201ENST00000338508 AMMECR1Q9Y4X0 333 aaPredicted RBP10.55□□□□□ -0.72
SHANK2-201ENST00000338508 TRBV23-1A0A0A0MS06 115 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 TNFRSF10CO14798 259 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 FZD6O60353 706 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 SBK3P0C264 359 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 TMIGD3P0DMS9 266 aaPredicted RBP10.55□□□□□ -0.72
SHANK2-201ENST00000338508 GPNMBQ14956 572 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 VSIG4Q9Y279 399 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 KLF3P57682 345 aaPredicted RBP10.55□□□□□ -0.72
SHANK2-201ENST00000338508 B2MP61769 119 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 PRDM14Q9GZV8 571 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 FAM53CQ9NYF3 392 aa10.55□□□□□ -0.72
SHANK2-201ENST00000338508 FCN1O00602 326 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 DHHO43323 396 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 PMS2P11Q13670 270 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 TMEM215Q68D42 235 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 ALKAL1Q6UXT8 129 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 ETV3LQ6ZN32 361 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 LYG2Q86SG7 212 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 KTI12Q96EK9 354 aaPredicted RBP10.54□□□□□ -0.72
SHANK2-201ENST00000338508 PRO1933Q9H354 126 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 CHODLQ9H9P2 273 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 KCNE3Q9Y6H6 103 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 TMSB15BA0A087X1C1 80 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 UBE2L6O14933 153 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 SOX8P57073 446 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 SRSF5Q13243 272 aaKnown RBP10.54□□□□□ -0.72
SHANK2-201ENST00000338508 C19orf43Q9BQ61 176 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 CNTD2Q9H8S5 307 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 IGKV3OR2-268A0A0C4DH90 116 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 M0R3E3 92 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 GEMIN2O14893 280 aaKnown RBP10.54□□□□□ -0.72
SHANK2-201ENST00000338508 AKR7A2O43488 359 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 AVPR2P30518 371 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 SRSF9Q13242 221 aaKnown RBP eCLIP10.54□□□□□ -0.72
SHANK2-201ENST00000338508 B3GNTL1Q67FW5 361 aaPredicted RBP10.54□□□□□ -0.72
SHANK2-201ENST00000338508 LRP12Q9Y561 859 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 NUP98P52948 1817 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 CGB1A6NKQ9 187 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 ERVS71-1P61550 626 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 GNG3P63215 75 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 RPL24P83731 157 aaKnown RBP10.54□□□□□ -0.72
SHANK2-201ENST00000338508 MAVSQ7Z434 540 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 FAM181BA6NEQ2 426 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 ZBTB42B2RXF5 422 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 SPCS3P61009 180 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 SLC25A35Q3KQZ1 300 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 ZNF774Q6NX45 483 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 TRAT1Q6PIZ9 186 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 UBALD2Q8IYN6 164 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 PHYHIPQ92561 330 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 UQCC2Q9BRT2 126 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 MMP25Q9NPA2 562 aa10.54□□□□□ -0.72
SHANK2-201ENST00000338508 TRAV17A0A0B4J275 112 aa10.53□□□□□ -0.72
SHANK2-201ENST00000338508 A0A1W2PPC4 97 aa10.53□□□□□ -0.72
SHANK2-201ENST00000338508 OR2T8A6NH00 312 aa10.53□□□□□ -0.72
SHANK2-201ENST00000338508 GUCA2BQ16661 112 aa10.53□□□□□ -0.72
SHANK2-201ENST00000338508 TBC1D26Q86UD7 250 aa10.53□□□□□ -0.72
SHANK2-201ENST00000338508 ABHD3Q8WU67 409 aa10.53□□□□□ -0.72
SHANK2-201ENST00000338508 PCGF1Q9BSM1 259 aa10.53□□□□□ -0.72
SHANK2-201ENST00000338508 FRG2CA6NGY1 282 aa10.53□□□□□ -0.72
SHANK2-201ENST00000338508 MT-CO3P00414 261 aa10.53□□□□□ -0.72
SHANK2-201ENST00000338508 POU3F3P20264 500 aaPredicted RBP10.53□□□□□ -0.72
SHANK2-201ENST00000338508 FMODQ06828 376 aa10.53□□□□□ -0.72
SHANK2-201ENST00000338508 SLC25A30Q5SVS4 291 aa10.53□□□□□ -0.72
SHANK2-201ENST00000338508 LPAR5Q9H1C0 372 aa10.53□□□□□ -0.72
SHANK2-201ENST00000338508 THYN1Q9P016 225 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms