RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 DBPQ10586 325 aaPredicted RBP13.26□□□□□ -0.29
C9orf47-201ENST00000334490 C1orf185Q5T7R7 199 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 XAF1Q6GPH4 301 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 ZNF441Q8N8Z8 693 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 RPS10P5Q9NQ39 176 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 GPR37O15354 613 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 GALP22466 123 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 CHATP28329 748 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 MVDP53602 400 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 SNRPNP63162 240 aaKnown RBP13.25□□□□□ -0.29
C9orf47-201ENST00000334490 C6orf201Q7Z4U5 140 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 UBAC2Q8NBM4 344 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 GPA33Q99795 319 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 CYSLTR2Q9NS75 346 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 NPAP1Q9NZP6 1156 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 CEACAM1P13688 526 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 PRSS53Q2L4Q9 553 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 INO80CQ6PI98 192 aaPredicted RBP13.25□□□□□ -0.29
C9orf47-201ENST00000334490 MALSU1Q96EH3 234 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 FYTTD1Q96QD9 318 aaKnown RBP13.25□□□□□ -0.29
C9orf47-201ENST00000334490 ARV1Q9H2C2 271 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 UBTD1Q9HAC8 227 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 LAMP3Q9UQV4 416 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 DICER1Q9UPY3 1922 aaKnown RBP13.25□□□□□ -0.29
C9orf47-201ENST00000334490 OR4E1P0C645 316 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 HIST1H1DP16402 221 aaKnown RBP13.25□□□□□ -0.29
C9orf47-201ENST00000334490 PCOLCEQ15113 449 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 TTC28Q96AY4 2481 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 K7ESF4 209 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 PDCD6O75340 191 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 UPK3AO75631 287 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 GNG10P50151 68 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 HTD2P86397 168 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 SSBP1Q04837 148 aaKnown RBP13.25□□□□□ -0.29
C9orf47-201ENST00000334490 ZNF816Q0VGE8 651 aaPredicted RBP13.25□□□□□ -0.29
C9orf47-201ENST00000334490 FAM214BQ7L5A3 538 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 THNSL2Q86YJ6 484 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 ARRDC1Q8N5I2 433 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 CNTD2Q9H8S5 307 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 SAP30LQ9HAJ7 183 aa13.25□□□□□ -0.29
C9orf47-201ENST00000334490 RYDENQ9NUL5 291 aaKnown RBP13.25□□□□□ -0.29
C9orf47-201ENST00000334490 DEFB108AA8MXU0 73 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 HPNP05981 417 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 SLC51BQ86UW2 128 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 TREM2Q9NZC2 230 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 TMEM272A0A1B0GTI8 110 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 ZBTB25P24278 435 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 RSPO4Q2I0M5 234 aaPredicted RBP13.24□□□□□ -0.29
C9orf47-201ENST00000334490 MOB1BQ7L9L4 216 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 LYG1Q8N1E2 194 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 ADIPOR1Q96A54 375 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 GUCD1Q96NT3 240 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 SRRQ9GZT4 340 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 TMEM11P17152 192 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 BAK1Q16611 211 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 OR6S1Q8NH40 331 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 SLC17A5Q9NRA2 495 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 ZNF230Q9UIE0 474 aaPredicted RBP13.24□□□□□ -0.29
C9orf47-201ENST00000334490 CSAG2Q9Y5P2 127 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 SCN5AQ14524 2016 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 HOXD4P09016 255 aaPredicted RBP13.24□□□□□ -0.29
C9orf47-201ENST00000334490 PPT1P50897 306 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 MMP15P51511 669 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 TESK1Q15569 626 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 RPEQ96AT9 228 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 OR5V1Q9UGF6 321 aa13.24□□□□□ -0.29
C9orf47-201ENST00000334490 hADV38S2A0JD32 116 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 AHRRA9YTQ3 701 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 GPR31O00270 319 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 CDIPTO14735 213 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 EFEMP2O95967 443 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 CLEC3BP05452 202 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 ELLP55199 621 aaPredicted RBP13.23□□□□□ -0.29
C9orf47-201ENST00000334490 DMKNQ6E0U4 476 aaPredicted RBP13.23□□□□□ -0.29
C9orf47-201ENST00000334490 OR10AC1Q8NH08 325 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 CMTM2Q8TAZ6 248 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 TAAR6Q96RI8 345 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 MS4A5Q9H3V2 200 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 ERRFI1Q9UJM3 462 aaPredicted RBP13.23□□□□□ -0.29
C9orf47-201ENST00000334490 NCBP2LA6PVI3 153 aaKnown RBP13.23□□□□□ -0.29
C9orf47-201ENST00000334490 IAPPP10997 89 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 RPS2P15880 293 aaKnown RBP13.23□□□□□ -0.29
C9orf47-201ENST00000334490 GABRB1P18505 474 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 COX7A1P24310 79 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 CEACAM6P40199 344 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 THBS3P49746 956 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 MDP1Q86V88 176 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 MFSD4AQ8N468 514 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 TMEM229BQ8NBD8 167 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 SLC26A10Q8NG04 563 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 OR5D13Q8NGL4 314 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 SLC25A40Q8TBP6 338 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 PCNPQ8WW12 178 aaKnown RBP13.23□□□□□ -0.29
C9orf47-201ENST00000334490 MAGT1Q9H0U3 335 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 TRAV38-1A0A0B4J264 116 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 SSSCA1O60232 199 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 STUMQ69YW2 141 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 IL34Q6ZMJ4 242 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 Q6ZNX1 250 aa13.23□□□□□ -0.29
C9orf47-201ENST00000334490 PPP1R32Q7Z5V6 425 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms